Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 5.2e-86 320.9 144 100.0
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 3.7e-84 314.7 144 97.9
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 2.4e-67 258.8 146 80.8
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 7.0e-67 257.3 138 83.3
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 3.5e-66 255.0 146 79.5
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.7e-65 252.7 144 80.6
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 8.6e-65 250.4 143 80.4
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 8.6e-65 250.4 146 79.5
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 4.2e-64 248.1 144 77.8
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.6e-63 246.1 144 75.7
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 4.0e-62 241.5 144 75.7
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 4.0e-62 241.5 147 76.2
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 2.2e-60 235.7 145 77.2
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 2.2e-60 235.7 145 74.5
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 3.7e-60 235.0 144 75.0
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 6.3e-60 234.2 129 79.1
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.4e-59 232.3 151 70.9
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 3.1e-59 231.9 148 72.3
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 5.4e-59 231.1 150 71.3
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 4.5e-58 228.0 148 71.6
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 4.5e-58 228.0 143 72.7
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 5.9e-58 227.6 145 70.3
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 7.8e-58 227.3 145 71.7
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 1.3e-57 226.5 148 70.3
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 2.9e-57 225.3 146 71.9
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 5.0e-57 224.6 142 72.5
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 6.6e-57 224.2 149 70.5
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 6.6e-57 224.2 106 90.6
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 8.6e-57 223.8 147 73.5
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 1.1e-56 223.4 116 82.8
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 1.1e-56 223.4 147 73.5
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 1.5e-56 223.0 134 74.6
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.9e-56 222.6 158 66.5
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.9e-56 222.6 149 69.8
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 3.3e-56 221.9 147 72.8
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 7.3e-56 220.7 148 67.6
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 1.6e-55 219.5 132 75.8
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 3.6e-55 218.4 142 71.1
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 8.0e-55 217.2 142 70.4
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 1.8e-54 216.1 147 68.0
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.8e-54 216.1 193 56.5
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 6.8e-54 214.2 147 67.3
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.5e-53 213.0 137 70.8
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 2.0e-53 212.6 147 66.7
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 2.6e-53 212.2 151 63.6
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 4.4e-53 211.5 147 66.7
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 5.8e-53 211.1 124 74.2
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 7.5e-53 210.7 145 71.0
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 9.8e-53 210.3 110 80.9
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 9.8e-53 210.3 110 80.9
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 2.2e-52 209.1 144 65.3
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 3.2e-51 205.3 116 75.0
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 3.2e-51 205.3 105 82.9
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 5.4e-51 204.5 105 81.9
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 2.0e-50 202.6 123 70.7
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 3.5e-50 201.8 146 65.1
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 2.5e-48 195.7 105 76.2
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 3.3e-48 195.3 91 90.1
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 4.3e-48 194.9 105 79.0
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 2.9e-44 182.2 104 71.2
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 3.0e-41 172.2 104 71.2
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 5.0e-41 171.4 104 68.3
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 8.6e-41 170.6 88 83.0
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 8.6e-41 170.6 100 73.0
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 8.1e-39 164.1 76 90.8
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 2.6e-37 159.1 77 87.0
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 9.9e-37 157.1 97 70.1
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 6.6e-33 144.4 113 61.1
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 6.8e-30 134.4 74 73.0
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 8.9e-30 134.0 74 73.0
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.2e-28 129.4 103 61.2
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.0e-17 92.4 51 70.6
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 3.9e-09 65.5 66 48.5
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 1.6e-07 60.1 32 75.0
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 8.1e-07 57.8 38 57.9


User provided reference genes

Program Settings