Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 2.0e-68 262.3 130 100.0
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 2.9e-48 195.3 142 71.1
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 5.2e-45 184.5 145 69.7
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 2.0e-44 182.6 144 70.1
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 2.6e-44 182.2 140 70.0
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 2.6e-44 182.2 133 70.7
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 5.8e-44 181.0 110 80.0
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 7.5e-44 180.6 140 70.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 1.3e-43 179.9 122 74.6
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 7.0e-42 174.1 153 63.4
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 9.2e-42 173.7 115 78.3
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 2.7e-41 172.2 135 68.1
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 4.6e-41 171.4 141 65.2
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 7.8e-41 170.6 139 64.7
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 5.0e-40 167.9 117 70.1
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.9e-39 166.0 144 59.7
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.9e-39 166.0 130 66.2
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 2.5e-39 165.6 115 76.5
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.5e-39 165.6 141 61.7
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 3.3e-39 165.2 136 64.7
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 5.6e-39 164.5 144 59.7
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 9.5e-39 163.7 141 63.1
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.6e-38 162.9 92 83.7
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.6e-38 162.9 137 65.7
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 3.6e-38 161.8 138 60.1
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 6.2e-38 161.0 135 62.2
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 8.0e-38 160.6 117 70.1
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.4e-37 159.8 92 82.6
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.4e-37 159.8 131 59.5
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.8e-37 159.5 107 72.9
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 1.8e-37 159.5 115 72.2
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 2.3e-37 159.1 108 71.3
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.3e-37 159.1 136 62.5
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 2.3e-37 159.1 107 71.0
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 3.1e-37 158.7 109 71.6
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 3.1e-37 158.7 119 68.1
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 4.0e-37 158.3 109 71.6
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 4.0e-37 158.3 130 69.2
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 6.8e-37 157.5 110 70.9
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 6.8e-37 157.5 141 61.0
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 8.9e-37 157.1 107 72.0
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 8.9e-37 157.1 107 72.0
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.2e-36 156.8 108 72.2
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.2e-36 156.8 93 82.8
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.5e-36 156.4 102 75.5
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.5e-36 156.4 102 75.5
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.5e-36 156.4 108 72.2
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 2.0e-36 156.0 115 73.0
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 2.6e-36 155.6 115 67.8
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 2.6e-36 155.6 115 67.8
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 3.4e-36 155.2 91 82.4
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 5.8e-36 154.5 110 70.0
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 5.8e-36 154.5 108 73.1
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 5.8e-36 154.5 112 67.9
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 7.5e-36 154.1 95 76.8
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 7.5e-36 154.1 111 70.3
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 7.5e-36 154.1 108 72.2
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 9.8e-36 153.7 106 72.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 9.8e-36 153.7 109 70.6
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.3e-35 153.3 115 67.0
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.3e-35 153.3 136 61.8
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 1.7e-35 152.9 169 52.7
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.2e-35 152.5 117 68.4
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 2.9e-35 152.1 91 83.5
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 2.9e-35 152.1 120 67.5
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.9e-35 151.4 114 69.3
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 2.4e-34 149.1 88 77.3
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 4.1e-34 148.3 109 67.9
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 7.0e-34 147.5 105 66.7
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.2e-33 146.7 88 78.4
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.5e-33 145.2 139 57.6
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 3.5e-33 145.2 105 68.6
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 6.0e-33 144.4 115 63.5
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 6.0e-33 144.4 114 65.8
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.0e-32 143.7 90 76.7
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.0e-32 143.7 106 69.8
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 1.0e-32 143.7 106 67.9
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.0e-32 143.7 106 67.9
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 2.3e-32 142.5 109 66.1
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 6.6e-32 141.0 96 75.0
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 6.6e-32 141.0 106 67.0
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 5.6e-31 137.9 88 75.0
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 9.5e-31 137.1 91 73.6
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.6e-30 136.3 96 68.8
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 1.6e-30 136.3 96 68.8
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.6e-30 136.3 74 85.1
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 1.6e-30 136.3 87 71.3
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.9e-26 122.9 66 81.8
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.4e-26 122.5 141 55.3
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 3.2e-26 122.1 74 74.3
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 9.2e-26 120.6 141 54.6
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 6.0e-25 117.9 71 73.2
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 2.3e-24 115.9 100 61.0
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 1.1e-23 113.6 101 52.5
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.4e-21 106.7 91 61.5
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 1.4e-21 106.7 87 63.2
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 7.1e-18 94.4 81 60.5
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.8e-13 79.7 132 39.4
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 2.4e-13 79.3 115 41.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 9.9e-12 73.9 82 41.5
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 9.9e-12 73.9 63 61.9
Dinv35698 Davidia involucrata HOM05D007368 ORTHO05D009330 1.6e-06 56.6 30 93.3


User provided reference genes

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