Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G0390 Trochodendron aralioides HOM05D005457 ORTHO05D006350 0.0e+00 1345.1 747 100.0
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 2.2e-241 839.3 715 69.7
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 2.4e-126 457.2 720 46.5
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 6.8e-105 386.0 718 42.3
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 6.8e-105 386.0 718 42.3
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 6.8e-105 386.0 718 42.3
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 1.2e-104 385.2 745 42.4
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 7.0e-94 349.4 733 40.0
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.1e-91 342.0 715 41.0
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 8.9e-89 332.4 651 41.2
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 8.9e-73 279.3 728 37.6
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 3.2e-70 270.8 729 36.2
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 4.0e-65 253.8 723 37.9
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 6.9e-57 226.5 710 33.4
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 3.1e-49 201.1 682 33.3
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.3e-47 195.7 573 34.4
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 1.9e-46 191.8 742 31.5
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 1.9e-46 191.8 714 34.2
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 7.1e-46 189.9 713 31.0
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 1.6e-42 178.7 720 31.2
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 3.1e-41 174.5 727 30.8
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 1.6e-37 162.2 712 31.5
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 4.3e-35 154.1 674 30.6
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 2.4e-33 148.3 743 32.6
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 2.0e-32 145.2 741 29.4
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 5.0e-31 140.6 725 33.0
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 1.3e-28 132.5 706 31.2
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 1.1e-25 122.9 669 30.5
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.4e-24 117.9 424 32.5
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.1e-21 108.6 608 30.8
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.0e-20 106.3 619 30.0
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 2.3e-20 105.1 720 27.5
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.7e-18 99.0 430 29.5
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 6.9e-17 93.6 252 35.7
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 3.8e-15 87.8 471 29.9
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 5.0e-15 87.4 639 29.0
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 3.2e-14 84.7 720 28.1
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 2.1e-13 82.0 729 27.7
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 5.1e-12 77.4 223 34.5
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.5e-11 75.9 692 25.9
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.4e-11 74.3 714 27.2
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 9.7e-11 73.2 339 30.1
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 2.2e-10 72.0 731 26.9
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 2.2e-10 72.0 714 27.3
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.2e-10 72.0 714 27.3
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 2.2e-10 72.0 663 26.5
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.4e-09 68.6 470 29.6
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.4e-09 68.6 525 27.8
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 3.1e-09 68.2 352 31.5
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 1.2e-08 66.2 150 40.7
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 4.5e-08 64.3 445 26.7
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 4.5e-08 64.3 182 35.2
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 1.0e-07 63.2 589 25.3
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 2.5e-06 58.5 740 23.8
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 5.5e-06 57.4 103 41.7


User provided reference genes

Program Settings