Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1005 Trochodendron aralioides HOM05D009778 ORTHO05D012400 3.4e-82 308.5 186 100.0
TAR374G1624 Trochodendron aralioides HOM05D009778 ORTHO05D012400 1.6e-34 150.2 180 63.9
TAR622G0297 Trochodendron aralioides HOM05D009778 ORTHO05D012400 1.8e-30 136.7 180 63.3
Haze_07664 Corylus avellana HOM05D009778 ORTHO05D011741 5.2e-22 108.6 143 45.5
Haze_07668 Corylus avellana HOM05D009778 ORTHO05D011741 5.2e-22 108.6 143 45.5
GSVIVG01007942001 Vitis vinifera HOM05D009778 ORTHO05D012400 7.8e-18 94.7 132 47.0
QL10p018461 Quercus lobata HOM05D009778 ORTHO05D011741 6.1e-15 85.1 182 34.1
Dinv38760 Davidia involucrata HOM05D009778 ORTHO05D011741 3.4e-13 79.3 88 50.0
Nn4g23317 Nelumbo nucifera HOM05D009778 ORTHO05D012400 4.4e-13 79.0 124 42.7
Actinidia31953 Actinidia chinensis HOM05D012451 ORTHO05D012400 1.7e-12 77.0 113 43.4
Aqoxy3G03545 Aquilegia oxysepala HOM05D012451 ORTHO05D012400 1.7e-12 77.0 187 42.2
Thecc.03G095600 Theobroma cacao HOM05D016464 ORTHO05D011741 3.7e-12 75.9 164 35.4
Dinv34109 Davidia involucrata HOM05D012451 ORTHO05D012400 2.7e-10 69.7 119 41.2
LjContig00357g0013731 Lotus japonicus HOM05D009778 ORTHO05D011741 6.0e-10 68.6 139 37.4
Rhsim12G0077300 Rhododendron simsii HOM05D012451 ORTHO05D012400 6.0e-10 68.6 113 38.9
vmacro01335 Vaccinium macrocarpon HOM05D012451 ORTHO05D012400 6.0e-10 68.6 113 40.7
TWI81G0418 Tripterygium wilfordii HOM05D009778 ORTHO05D011741 7.8e-10 68.2 132 38.6
Haze_07665 Corylus avellana HOM05D000235 ORTHO05D000147 3.9e-09 65.9 134 36.6
Actinidia04857 Actinidia chinensis HOM05D009778 ORTHO05D011741 8.6e-09 64.7 74 45.9
Rhsim08G0150100 Rhododendron simsii HOM05D009778 ORTHO05D011741 1.1e-08 64.3 82 47.6
Hma1.2p1_0357F.1_g134370 Hydrangea macrophylla HOM05D012451 ORTHO05D012400 1.9e-08 63.5 113 38.1
Ciclev10024560m.g Citrus clementina HOM05D016464 ORTHO05D011741 2.5e-08 63.2 149 33.6
QL10p018468 Quercus lobata HOM05D009778 ORTHO05D011741 2.5e-08 63.2 151 33.1
Actinidia09236 Actinidia chinensis HOM05D009778 ORTHO05D011741 3.3e-08 62.8 108 38.9
arahy.Tifrunner.gnm1.ann1.TNLF7V Arachis hypogaea HOM05D009778 ORTHO05D011741 9.5e-08 61.2 140 32.9
DCAR_026029 Daucus carota HOM05D009778 ORTHO05D011741 1.6e-07 60.5 92 41.3
COL.COLO4_09313 Corchorus olitorius HOM05D016464 ORTHO05D011741 3.6e-07 59.3 165 30.3
Duzib205G0925 Durio zibethinus HOM05D016464 ORTHO05D011741 3.6e-07 59.3 175 29.7
HanXRQChr12g0379231 Helianthus annuus HOM05D012451 ORTHO05D012400 3.6e-07 59.3 126 38.1
PSO017G1593 Papaver somniferum HOM05D023677 ORTHO05D011741 3.6e-07 59.3 121 38.8
PSO478G0966 Papaver somniferum HOM05D023677 ORTHO05D011741 6.2e-07 58.5 119 37.8
Hma1.2p1_0060F.1_g033400 Hydrangea macrophylla HOM05D009778 ORTHO05D011741 1.1e-06 57.8 75 40.0
PSO242G0017 Papaver somniferum HOM05D023677 ORTHO05D011741 1.8e-06 57.0 109 38.5
PSO170G0818 Papaver somniferum HOM05D023677 ORTHO05D011741 2.3e-06 56.6 100 40.0
Duzib068G0386 Durio zibethinus HOM05D009778 ORTHO05D011741 6.8e-06 55.1 110 38.2


User provided reference genes

Program Settings