Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 1.1e-147 526.6 262 100.0
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 7.9e-101 370.9 262 74.8
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.2e-96 357.1 268 69.0
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.3e-92 342.8 347 56.8
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 2.5e-91 339.3 345 55.7
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 2.5e-91 339.3 368 53.8
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 3.3e-91 339.0 345 57.1
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 4.3e-91 338.6 348 56.3
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.3e-90 337.0 350 55.4
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 3.7e-90 335.5 228 75.4
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 6.3e-90 334.7 342 57.0
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 8.2e-90 334.3 346 56.9
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.1e-89 334.0 344 57.0
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.4e-89 333.6 244 73.8
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.4e-89 332.8 345 56.2
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 5.3e-89 331.6 244 73.0
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 5.3e-89 331.6 233 73.4
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 6.9e-89 331.3 344 56.1
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.2e-88 330.5 344 56.7
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.5e-88 328.6 232 75.0
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 8.5e-87 324.3 242 72.7
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 9.4e-86 320.9 232 72.0
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 2.1e-85 319.7 345 53.9
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.7e-85 319.3 340 55.9
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 4.7e-85 318.5 347 53.9
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 1.0e-84 317.4 250 70.0
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.8e-84 316.6 232 72.8
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 1.8e-84 316.6 230 72.2
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 3.9e-84 315.5 232 71.6
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 8.8e-84 314.3 245 67.8
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 8.8e-84 314.3 245 69.8
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.1e-83 313.9 232 72.8
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.1e-83 313.9 249 69.9
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.5e-83 313.5 234 70.9
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.5e-83 313.5 348 54.3
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 2.0e-83 313.2 249 68.7
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 2.6e-83 312.8 249 68.7
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 4.4e-83 312.0 228 72.4
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 5.7e-83 311.6 228 73.2
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 5.7e-83 311.6 230 72.2
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 5.7e-83 311.6 349 53.0
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 5.7e-83 311.6 352 51.4
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 7.4e-83 311.2 345 52.8
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 7.4e-83 311.2 232 71.6
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 7.4e-83 311.2 232 71.6
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 9.7e-83 310.8 228 73.2
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 9.7e-83 310.8 230 72.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 1.3e-82 310.5 232 71.6
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.3e-82 310.5 341 52.5
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 4.8e-82 308.5 227 68.7
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 6.3e-82 308.1 239 71.5
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.1e-81 307.4 228 71.9
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.1e-81 307.4 232 71.6
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 2.4e-81 306.2 353 51.6
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 4.1e-81 305.4 230 71.7
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 5.3e-81 305.1 244 67.6
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 7.0e-81 304.7 229 69.0
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 7.0e-81 304.7 237 70.9
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 9.1e-81 304.3 224 70.1
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 9.1e-81 304.3 229 69.4
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.5e-80 303.5 262 64.1
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 2.0e-80 303.1 244 68.0
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 4.5e-80 302.0 243 67.5
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 5.9e-80 301.6 230 68.7
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 5.9e-80 301.6 249 65.9
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 1.0e-79 300.8 233 67.8
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.9e-79 299.3 232 69.4
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 5.0e-79 298.5 227 68.7
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.1e-78 297.4 232 69.0
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.9e-78 296.6 212 74.5
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.9e-78 296.6 227 68.7
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 2.5e-78 296.2 232 67.7
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 7.2e-78 294.7 233 67.0
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.2e-77 293.9 252 64.7
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.6e-77 293.5 229 66.4
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.6e-77 293.5 344 49.7
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.1e-77 293.1 229 67.2
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 3.6e-77 292.4 234 68.4
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 6.1e-77 291.6 233 66.1
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 1.8e-76 290.0 235 65.1
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.8e-76 290.0 319 53.9
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 3.0e-76 289.3 233 66.5
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.9e-76 288.9 248 64.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 3.9e-76 288.9 340 51.5
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 6.7e-76 288.1 235 65.1
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 6.7e-76 288.1 248 65.3
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 6.7e-76 288.1 248 64.5
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.1e-75 287.3 239 64.9
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 3.3e-75 285.8 233 65.7
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 4.4e-75 285.4 235 64.3
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.3e-74 283.9 233 65.2
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 2.2e-74 283.1 233 65.2
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 2.2e-74 283.1 233 65.2
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.1e-73 280.8 248 62.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.4e-73 280.4 341 49.0
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.2e-72 277.3 228 65.8
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.6e-72 276.2 334 51.5
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 2.5e-70 269.6 203 70.0
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 4.4e-67 258.8 210 68.1
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 7.2e-62 241.5 190 70.0
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 2.1e-53 213.4 249 51.4
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.4e-49 199.9 252 49.2
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 8.3e-42 174.9 228 44.7
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 4.7e-37 159.1 229 43.2
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 8.0e-37 158.3 240 38.3
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 1.8e-28 130.6 80 80.0
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 4.0e-28 129.4 237 38.0
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 3.2e-25 119.8 116 57.8
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.4e-20 104.4 123 45.5
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.8e-20 104.0 155 39.4
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.6e-19 100.1 98 56.1
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 1.7e-15 87.4 115 46.1
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 8.7e-07 58.5 38 71.1
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 1.9e-06 57.4 237 27.4


User provided reference genes

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