Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 7.6e-195 683.7 362 100.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 7.0e-156 554.3 321 82.9
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.0e-155 552.7 325 81.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 7.7e-155 550.8 314 84.7
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 3.2e-153 545.4 325 82.2
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.3e-151 539.3 326 80.4
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 4.0e-151 538.5 324 81.8
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 8.8e-151 537.3 322 80.7
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 2.6e-150 535.8 325 79.4
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 2.6e-150 535.8 325 80.0
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 7.5e-150 534.3 324 80.2
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 7.5e-150 534.3 343 77.3
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 7.5e-150 534.3 326 81.3
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.2e-149 532.7 321 80.1
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.7e-149 531.9 323 80.5
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.8e-149 531.6 322 79.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.1e-148 530.4 319 79.6
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.2e-147 526.9 325 79.7
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 1.1e-145 520.4 322 75.8
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.5e-145 520.0 322 77.6
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.9e-145 519.6 325 78.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 4.2e-145 518.5 322 75.5
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.6e-144 516.5 324 79.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 3.0e-143 512.3 312 80.1
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 6.8e-143 511.1 315 78.4
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.5e-142 510.0 312 79.5
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 5.7e-142 508.1 327 77.4
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 7.5e-142 507.7 316 77.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.3e-141 506.9 312 79.5
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 3.7e-141 505.4 314 78.0
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 6.3e-141 504.6 314 78.3
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.1e-140 503.8 327 74.3
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.4e-140 503.4 315 77.1
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.4e-140 503.4 312 77.2
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 5.4e-140 501.5 314 78.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 7.0e-140 501.1 314 78.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.2e-139 500.4 324 75.9
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.2e-139 500.4 314 76.1
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 2.7e-139 499.2 315 75.9
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.0e-138 497.3 339 72.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.2e-138 496.1 320 76.9
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.2e-138 496.1 314 77.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 5.0e-138 495.0 314 76.8
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 8.5e-138 494.2 325 75.4
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 8.5e-138 494.2 314 77.4
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 8.5e-138 494.2 312 77.9
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.1e-137 493.8 310 77.7
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.5e-137 493.4 320 76.2
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.5e-137 492.7 320 76.2
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 3.2e-137 492.3 320 76.2
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 4.2e-137 491.9 320 75.9
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.6e-136 490.0 321 76.3
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 2.1e-136 489.6 321 76.0
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 2.1e-136 489.6 321 76.0
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.8e-135 486.5 334 72.8
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.3e-135 486.1 321 74.1
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 3.4e-134 482.3 315 74.6
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.3e-133 480.3 302 76.8
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 3.7e-133 478.8 279 84.6
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.4e-132 476.9 323 73.1
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 3.1e-132 475.7 338 70.1
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 3.1e-132 475.7 347 70.6
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 9.2e-132 474.2 314 74.8
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.0e-130 470.7 311 73.0
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.6e-128 463.4 312 70.5
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.3e-127 459.5 310 70.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.0e-127 459.1 310 71.3
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.5e-126 456.8 310 70.6
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.3e-125 453.8 310 71.6
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.7e-125 453.4 310 71.3
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.9e-125 452.6 310 71.3
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.9e-125 452.6 310 70.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.1e-124 450.7 338 65.7
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 7.0e-124 448.0 276 81.9
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 9.2e-124 447.6 293 74.7
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.6e-123 446.8 310 69.7
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 5.9e-123 444.9 289 77.5
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.3e-122 443.7 311 67.5
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 5.0e-122 441.8 311 68.2
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 6.6e-122 441.4 310 69.4
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.2e-118 430.6 322 63.4
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.9e-117 426.0 323 64.4
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 2.4e-116 422.9 313 64.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 2.0e-110 403.3 313 64.9
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 9.9e-110 401.0 309 60.2
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.7e-109 399.1 254 77.6
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.1e-107 393.3 238 81.9
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.3e-106 390.6 237 79.3
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.1e-106 388.7 317 63.4
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 5.1e-106 388.7 320 62.8
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 3.1e-103 379.4 290 61.0
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 2.5e-97 359.8 309 56.0
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.8e-96 356.3 308 55.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-91 339.3 310 51.9
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-91 339.3 310 51.9
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.0e-91 338.6 308 52.6
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-89 333.6 308 52.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-86 324.3 308 51.3
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.6e-86 321.6 307 51.5
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.9e-86 321.2 308 50.0
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 9.9e-86 321.2 313 55.0
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 8.4e-85 318.2 222 69.8
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.4e-84 317.4 259 60.2
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-83 313.9 313 48.6
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 8.4e-77 291.6 318 49.4
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.1e-72 276.9 323 48.3
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.2e-68 263.1 319 43.6
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.2e-59 234.6 213 54.0
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 8.5e-45 185.3 278 38.8
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.0e-34 151.8 330 34.5
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.0e-30 137.5 117 58.1
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 1.1e-07 62.0 40 70.0


User provided reference genes

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