Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0025 Trochodendron aralioides HOM05D006504 ORTHO05D007867 1.6e-59 233.0 163 100.0
Nn8g38840 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.2e-46 190.3 160 73.8
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 6.1e-43 177.9 165 79.4
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 2.6e-41 172.6 166 79.5
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 9.7e-41 170.6 95 90.5
Aqoxy5G00309 Aquilegia oxysepala HOM05D006504 ORTHO05D007867 2.2e-40 169.5 175 74.9
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 5.3e-39 164.9 171 77.2
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 7.0e-39 164.5 95 85.3
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 3.5e-38 162.2 171 76.0
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 4.5e-38 161.8 95 84.2
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 4.5e-38 161.8 95 85.3
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 4.5e-38 161.8 159 72.3
Cc05_g02540 Coffea canephora HOM05D006504 ORTHO05D007867 1.3e-37 160.2 95 84.2
CiPaw.01G224400 Carya illinoinensis HOM05D006504 ORTHO05D007867 2.9e-37 159.1 95 84.2
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 8.5e-37 157.5 95 82.1
Nn8g38837 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.5e-36 156.8 140 72.1
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 1.9e-36 156.4 190 57.4
Prupe.3G049000 Prunus persica HOM05D006504 ORTHO05D007867 1.9e-36 156.4 95 81.1
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 2.5e-36 156.0 95 81.1
Glyma.07G009300 Glycine max HOM05D006504 ORTHO05D007867 5.5e-36 154.8 95 81.1
Gohir.D10G060350 Gossypium hirsutum HOM05D006504 ORTHO05D007867 5.5e-36 154.8 95 81.1
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 7.2e-36 154.5 95 82.1
Gorai.011G064600 Gossypium raimondii HOM05D006504 ORTHO05D007867 7.2e-36 154.5 95 81.1
TWI31G0577 Tripterygium wilfordii HOM05D006504 ORTHO05D007867 7.2e-36 154.5 95 84.2
HPP92_023888 Vanilla planifolia HOM05D006504 ORTHO05D007867 7.2e-36 154.5 165 61.8
Lj5A44T119 Lonicera japonica HOM05D006504 ORTHO05D007867 1.6e-35 153.3 95 80.0
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 1.6e-35 153.3 99 79.8
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.1e-35 152.9 168 60.7
arahy.Tifrunner.gnm1.ann1.2CYW67 Arachis hypogaea HOM05D006504 ORTHO05D007867 2.7e-35 152.5 95 80.0
arahy.Tifrunner.gnm1.ann1.S1QT98 Arachis hypogaea HOM05D006504 ORTHO05D007867 2.7e-35 152.5 95 80.0
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 3.6e-35 152.1 168 66.1
Nn5g26799 Nelumbo nucifera HOM05D006504 ORTHO05D007867 6.1e-35 151.4 144 72.9
PSO210G6889 Papaver somniferum HOM05D006504 ORTHO05D007867 6.1e-35 151.4 92 82.6
FAN14G5793 Fragaria x ananassa HOM05D006504 ORTHO05D007867 8.0e-35 151.0 171 68.4
Lalb_Chr25g0280741 Lupinus albus HOM05D006504 ORTHO05D007867 1.0e-34 150.6 95 78.9
FvH4_6g33500 Fragaria vesca HOM05D006504 ORTHO05D007867 1.4e-34 150.2 172 69.2
Glyma.08G192500 Glycine max HOM05D006504 ORTHO05D007867 1.4e-34 150.2 95 78.9
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 1.4e-34 150.2 95 78.9
PSO210G7829 Papaver somniferum HOM05D006504 ORTHO05D007867 2.3e-34 149.4 92 81.5
CsaV3_3G043850 Cucumis sativus L. HOM05D006504 ORTHO05D007867 3.0e-34 149.1 95 76.8
THA.LOC104822636 Tarenaya hassleriana HOM05D006504 ORTHO05D007867 3.0e-34 149.1 95 78.9
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 4.0e-34 148.7 177 68.9
VMungo0331G1418 Vigna mungo HOM05D006504 ORTHO05D007867 4.0e-34 148.7 95 77.9
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 5.2e-34 148.3 168 63.1
QL05p000757 Quercus lobata HOM05D006504 ORTHO05D007867 5.2e-34 148.3 95 81.1
QL05p000665 Quercus lobata HOM05D006504 ORTHO05D007867 1.2e-33 147.1 95 80.0
COL.COLO4_30670 Corchorus olitorius HOM05D006504 ORTHO05D007867 2.0e-33 146.4 86 84.9
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 3.4e-33 145.6 95 76.8
ECA234G1551 Erigeron canadensis HOM05D000001 ORTHO05D009948 4.4e-33 145.2 95 75.8
Medtr8g017180 Medicago truncatula HOM05D006504 ORTHO05D007867 4.4e-33 145.2 95 75.8
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 5.7e-33 144.8 95 77.9
FAN21G2275 Fragaria x ananassa HOM05D006504 ORTHO05D007867 5.7e-33 144.8 94 77.7
Lj3g0009120 Lotus japonicus HOM05D006504 ORTHO05D007867 7.5e-33 144.4 95 74.7
ATR0661G108 Amborella trichopoda HOM05D006504 ORTHO05D007867 9.8e-33 144.1 95 76.8
Sp1g40740 Schrenkiella parvula HOM05D006504 ORTHO05D007867 2.8e-32 142.5 93 75.3
Psat4g188440 Pisum sativum HOM05D006504 ORTHO05D007867 6.3e-32 141.4 95 73.7
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 1.1e-31 140.6 95 73.7
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 1.1e-31 140.6 95 73.7
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 1.4e-31 140.2 169 56.8
Carub.0001s4357 Capsella rubella HOM05D006504 ORTHO05D007867 1.4e-31 140.2 93 73.1
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 1.8e-31 139.8 94 75.5
TPR.G37598 Trifolium pratense HOM05D006504 ORTHO05D007867 1.8e-31 139.8 95 73.7
Os01g0501000 Oryza sativa ssp. japonica HOM05D006504 ORTHO05D007867 2.4e-31 139.4 95 71.6
CDE04G1380 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 5.4e-31 138.3 160 50.0
AT1G55080 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 7.0e-31 137.9 97 69.1
AL1G63070 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 9.1e-31 137.5 95 69.5
HPP92_023833 Vanilla planifolia HOM05D006504 ORTHO05D007867 1.6e-30 136.7 91 70.3
BolC3t21536H Brassica oleracea HOM05D006504 ORTHO05D007867 2.0e-30 136.3 94 73.4
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 2.7e-30 136.0 94 73.4
arahy.Tifrunner.gnm1.ann1.Y1EG1J Arachis hypogaea HOM05D006504 ORTHO05D007867 3.5e-30 135.6 84 81.0
BcaB04g17003 Brassica carinata HOM05D006504 ORTHO05D007867 4.5e-30 135.2 94 73.4
BcaC01g01455 Brassica carinata HOM05D006504 ORTHO05D007867 4.5e-30 135.2 94 72.3
Cfa003580 Carpinus fangiana HOM05D006504 ORTHO05D007867 5.9e-30 134.8 85 81.2
Sc12g0010270 Simmondsia chinensis HOM05D006504 ORTHO05D007867 5.9e-30 134.8 84 79.8
CARHR044670 Cardamine hirsuta HOM05D006504 ORTHO05D007867 2.3e-29 132.9 95 67.4
arahy.Tifrunner.gnm1.ann1.IBA4C6 Arachis hypogaea HOM05D006504 ORTHO05D007867 8.6e-29 131.0 85 77.6
MD09G1192700 Malus domestica HOM05D006504 ORTHO05D007867 1.5e-28 130.2 158 73.4
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 2.5e-28 129.4 95 68.4
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 5.5e-28 128.3 99 70.7
MELO3C030574.2 Cucumis melo HOM05D006504 ORTHO05D007867 7.2e-28 127.9 83 79.5
Ah.08g216230 Amaranthus hybridus HOM05D006504 ORTHO05D007867 1.2e-27 127.1 88 68.2
PGSC0003DMG400021202 Solanum tuberosum HOM05D006504 ORTHO05D007867 1.2e-27 127.1 87 73.6
BcaB03g13872 Brassica carinata HOM05D006504 ORTHO05D007867 5.7e-25 118.2 92 65.2
ATR0800G060 Amborella trichopoda HOM05D006504 ORTHO05D007867 7.5e-25 117.9 77 76.6
Aa31LG10G870 Aethionema arabicum HOM05D006504 ORTHO05D007867 1.7e-24 116.7 120 54.2
BolC6t36770H Brassica oleracea HOM05D006504 ORTHO05D007867 1.7e-24 116.7 96 67.7
A07p10460 Brassica napus HOM05D006504 ORTHO05D007867 3.7e-24 115.5 92 60.9
BraA07t28846Z Brassica rapa HOM05D006504 ORTHO05D007867 3.7e-24 115.5 92 60.9
BcaC06g35444 Brassica carinata HOM05D006504 ORTHO05D007867 4.9e-24 115.2 92 62.0
C07p16100 Brassica napus HOM05D006504 ORTHO05D007867 4.9e-24 115.2 92 62.0
BolC7t42095H Brassica oleracea HOM05D006504 ORTHO05D007867 4.9e-24 115.2 92 62.0
BraA05t20659Z Brassica rapa HOM05D006504 ORTHO05D007867 8.3e-24 114.4 96 66.7
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 1.1e-23 114.0 79 74.7
C03p92210 Brassica napus HOM05D001264 ORTHO05D007867 1.1e-23 114.0 79 74.7
CDE06G0601 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 5.4e-23 111.7 151 49.0
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 9.2e-23 110.9 104 61.5
Mapoly0004s0244 Marchantia polymorpha HOM05D006504 ORTHO05D007867 1.0e-21 107.5 96 57.3
SEGI_28258 Sequoiadendron giganteum HOM05D006504 ORTHO05D007867 1.5e-20 103.6 91 60.4
QL05p000679 Quercus lobata HOM05D006504 ORTHO05D007867 1.9e-20 103.2 87 69.0
QL05p000687 Quercus lobata HOM05D006504 ORTHO05D007867 1.9e-20 103.2 87 69.0
Carub.0001s2784 Capsella rubella HOM05D006504 ORTHO05D007867 4.3e-20 102.1 96 55.2
ClCG07G013760 Citrullus lanatus HOM05D006504 ORTHO05D007867 2.1e-19 99.8 81 67.9
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 6.1e-19 98.2 132 55.3
C06p15780 Brassica napus HOM05D001264 ORTHO05D001167 8.0e-19 97.8 79 72.2
A05p17670 Brassica napus HOM05D006504 ORTHO05D007867 1.8e-18 96.7 78 69.2
Zm00001eb066180 Zea mays HOM05D006504 ORTHO05D007867 4.0e-18 95.5 96 54.2
BcaC08g44177 Brassica carinata HOM05D001264 ORTHO05D001167 4.4e-17 92.0 79 69.6
TPR.G19289 Trifolium pratense HOM05D006504 ORTHO05D007867 1.9e-15 86.7 95 51.6
vmacro17023 Vaccinium macrocarpon HOM05D006504 ORTHO05D007867 9.2e-15 84.3 50 80.0
SMO358G0601 Selaginella moellendorffii HOM05D006504 ORTHO05D007867 2.7e-14 82.8 89 51.7
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 2.7e-14 82.8 77 61.0
Haze_15959 Corylus avellana HOM05D006504 ORTHO05D007867 3.5e-14 82.4 48 83.3
Sp3g12060 Schrenkiella parvula HOM05D006504 ORTHO05D007867 4.6e-14 82.0 78 56.4
AL1G43430 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 1.3e-13 80.5 72 58.3
Nitab4.5_0001219g0120 Nicotiana tabacum HOM05D006504 ORTHO05D007867 1.7e-13 80.1 88 54.5
DCAR_007625 Daucus carota HOM05D006504 ORTHO05D007867 8.6e-13 77.8 85 51.8
Thhalv10022201m.g Eutrema salsugineum HOM05D006504 ORTHO05D007867 1.2e-11 73.9 68 58.8
Pp3c21_4920 Physcomitrium patens HOM05D006504 ORTHO05D007867 5.2e-10 68.6 95 41.1
Phvul.010G138400 Phaseolus vulgaris HOM05D006504 ORTHO05D007867 5.4e-07 58.5 37 75.7
Aa31LG8G1010 Aethionema arabicum HOM05D006504 ORTHO05D007867 9.2e-07 57.8 57 50.9
AagrBONN_evm.TU.Sc2ySwM_344.1668 Anthoceros agrestis HOM05D006504 ORTHO05D007867 9.2e-07 57.8 57 47.4
SGA_v2.0_scaffold464G52010 Striga asiatica HOM05D006504 ORTHO05D007867 1.2e-06 57.4 43 65.1
AT1G29580 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 1.6e-06 57.0 89 40.4


User provided reference genes

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