Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 6.8e-47 191.0 95 100.0
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 5.4e-36 154.8 95 76.8
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 7.1e-36 154.5 89 84.3
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 6.6e-34 147.9 96 78.1
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 6.6e-34 147.9 86 80.2
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.9e-33 146.4 89 76.4
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 4.3e-33 145.2 90 78.9
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 5.6e-33 144.8 90 80.0
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 7.3e-33 144.4 96 71.9
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 7.3e-33 144.4 96 74.0
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 1.3e-32 143.7 96 70.8
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.6e-32 143.3 96 70.8
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 1.6e-32 143.3 90 76.7
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 3.6e-32 142.1 90 78.9
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 4.8e-32 141.7 95 67.4
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 4.8e-32 141.7 89 79.8
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 8.1e-32 141.0 87 78.2
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 3.1e-31 139.0 89 76.4
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 5.3e-31 138.3 93 75.3
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 6.9e-31 137.9 89 76.4
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 6.9e-31 137.9 89 76.4
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 9.0e-31 137.5 89 76.4
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 1.2e-30 137.1 93 65.6
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 1.5e-30 136.7 89 73.0
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 2.0e-30 136.3 97 68.0
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 2.0e-30 136.3 90 70.0
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.6e-30 136.0 88 73.9
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.6e-30 136.0 88 73.9
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 3.4e-30 135.6 97 67.0
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 4.5e-30 135.2 89 70.8
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 4.5e-30 135.2 86 75.6
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 5.8e-30 134.8 89 75.3
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 7.6e-30 134.4 96 68.8
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 9.9e-30 134.0 90 75.6
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.7e-29 133.3 95 67.4
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 1.7e-29 133.3 96 67.7
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 2.2e-29 132.9 96 64.6
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 2.9e-29 132.5 88 71.6
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 3.8e-29 132.1 88 69.3
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.8e-29 132.1 90 74.4
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 4.9e-29 131.7 75 82.7
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 4.9e-29 131.7 90 74.4
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 4.9e-29 131.7 88 69.3
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 4.9e-29 131.7 94 70.2
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 6.4e-29 131.3 96 65.6
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 6.4e-29 131.3 88 69.3
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 6.4e-29 131.3 86 70.9
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 6.4e-29 131.3 90 73.3
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.4e-28 130.2 79 78.5
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 2.4e-28 129.4 100 66.0
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 2.4e-28 129.4 88 70.5
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.4e-28 129.4 88 70.5
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 3.2e-28 129.0 90 67.8
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.2e-28 129.0 89 68.5
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 4.2e-28 128.6 96 65.6
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 4.2e-28 128.6 94 63.8
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 9.3e-28 127.5 89 69.7
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 2.1e-27 126.3 89 67.4
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 3.5e-27 125.6 92 68.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 7.9e-27 124.4 87 72.4
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 1.0e-26 124.0 75 78.7
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.0e-26 124.0 75 77.3
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.0e-26 124.0 79 69.6
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.3e-26 123.6 87 69.0
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.3e-26 123.6 89 66.3
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 3.0e-26 122.5 86 66.3
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 3.0e-26 122.5 87 67.8
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 5.1e-26 121.7 79 67.1
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 5.1e-26 121.7 75 76.0
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 6.7e-26 121.3 94 63.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 8.7e-26 120.9 86 65.1
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.1e-25 120.6 88 67.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 2.5e-25 119.4 97 57.7
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 2.5e-25 119.4 93 60.2
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.5e-25 119.4 87 69.0
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 3.3e-25 119.0 83 65.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 4.3e-25 118.6 87 63.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 4.3e-25 118.6 83 66.3
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 5.6e-25 118.2 86 65.1
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 5.6e-25 118.2 86 65.1
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 5.6e-25 118.2 86 67.4
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.3e-24 117.1 86 66.3
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.3e-24 117.1 86 66.3
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 1.6e-24 116.7 87 65.5
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.1e-24 116.3 80 73.8
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 8.1e-24 114.4 96 57.3
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 2.4e-23 112.8 94 57.4
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 9.0e-23 110.9 96 56.2
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 9.0e-23 110.9 87 59.8
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 1.2e-22 110.5 96 55.2
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 9.9e-22 107.5 94 55.3
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 2.2e-21 106.3 95 60.0
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 4.9e-21 105.1 86 57.0
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 4.9e-21 105.1 72 63.9
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 1.4e-20 103.6 85 57.6
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.9e-20 103.2 66 74.2
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 2.5e-20 102.8 91 52.7
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 2.5e-20 102.8 91 52.7
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 4.2e-20 102.1 91 52.7
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.2e-19 100.5 91 51.6
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.3e-18 96.3 63 73.0
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 4.3e-17 92.0 97 54.6
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 1.4e-15 87.0 92 50.0
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 2.4e-15 86.3 77 55.8
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 4.2e-12 75.5 95 46.3
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 9.3e-12 74.3 46 76.1
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.2e-11 73.9 99 42.4
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 2.3e-10 69.7 74 45.9
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.1e-09 67.4 47 66.0
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.1e-09 67.4 47 66.0


User provided reference genes

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