Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 2.4e-256 888.3 430 100.0
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 3.7e-188 661.8 427 73.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.2e-186 656.8 430 72.3
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 9.1e-179 630.6 394 75.4
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.5e-178 629.8 402 74.9
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.0e-177 627.1 413 72.2
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 5.0e-177 624.8 397 74.1
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 6.1e-175 617.8 404 71.8
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 5.2e-174 614.8 427 69.8
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 5.2e-174 614.8 389 74.0
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 2.2e-172 609.4 418 67.9
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 3.7e-172 608.6 402 71.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.8e-171 606.3 398 70.6
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 3.1e-171 605.5 401 68.8
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.6e-170 603.2 400 70.5
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 2.2e-169 599.4 400 70.0
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 3.8e-169 598.6 398 71.4
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 2.5e-168 595.9 409 69.2
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 1.6e-167 593.2 411 66.9
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 2.1e-167 592.8 402 68.4
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 3.6e-167 592.0 401 67.8
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 4.0e-166 588.6 396 68.2
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 8.8e-166 587.4 428 65.4
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.2e-165 587.0 414 66.2
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 2.0e-165 586.3 409 66.5
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 2.6e-165 585.9 414 65.9
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 2.2e-164 582.8 401 68.1
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 1.8e-163 579.7 417 66.2
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.2e-162 577.0 408 65.9
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 3.5e-162 575.5 390 69.7
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 4.5e-162 575.1 424 64.2
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 7.7e-162 574.3 409 65.5
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.0e-161 573.9 390 69.7
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.7e-161 573.2 393 70.2
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 5.0e-161 571.6 408 65.2
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 8.5e-161 570.9 415 66.0
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.1e-160 570.5 403 67.5
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 6.1e-159 564.7 406 65.3
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 4.0e-158 562.0 461 61.8
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 5.2e-158 561.6 404 67.6
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 8.8e-158 560.8 394 66.8
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.5e-157 560.1 397 66.0
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 1.5e-157 560.1 394 67.5
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.0e-157 559.7 403 65.3
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 2.6e-157 559.3 399 65.4
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 3.7e-156 555.4 402 63.9
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-155 553.9 385 65.7
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-155 553.9 386 66.1
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.4e-155 553.5 385 65.7
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.4e-155 553.5 385 66.0
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 2.4e-155 552.7 397 65.2
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 5.4e-155 551.6 433 60.3
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 5.4e-155 551.6 425 61.4
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.6e-154 550.1 421 65.3
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.0e-154 549.7 385 65.2
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 2.0e-154 549.7 392 64.0
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 4.5e-154 548.5 386 66.6
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.3e-153 547.0 385 64.7
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.7e-153 546.6 370 70.0
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 2.3e-153 546.2 433 60.5
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 3.8e-153 545.4 403 66.0
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 3.3e-152 542.3 411 64.5
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 9.5e-152 540.8 385 63.4
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 9.5e-152 540.8 352 70.5
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.7e-151 538.5 406 61.3
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 6.1e-151 538.1 400 66.0
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.3e-150 536.2 418 60.0
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.8e-147 526.6 409 61.4
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 1.6e-146 523.5 386 63.0
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.0e-145 520.8 381 63.3
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.7e-145 520.0 395 65.1
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 1.7e-145 520.0 418 60.8
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.1e-144 517.3 408 62.0
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 4.3e-144 515.4 408 57.4
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 6.1e-143 511.5 359 67.7
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 6.8e-142 508.1 350 69.1
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.2e-141 507.3 381 64.6
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 5.8e-141 505.0 493 52.9
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 9.8e-133 477.6 351 61.8
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 9.8e-133 477.6 288 79.2
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 3.2e-131 472.6 347 64.3
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.2e-131 472.6 340 68.5
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 3.5e-130 469.2 373 63.3
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 2.5e-128 463.0 425 55.1
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 9.5e-128 461.1 398 59.5
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 9.9e-117 424.5 418 53.3
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.4e-110 403.3 306 60.1
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 9.3e-107 391.3 397 49.9
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 9.6e-104 381.3 254 72.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 4.8e-103 379.0 411 50.9
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.6e-93 346.7 251 67.3
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 4.5e-93 345.9 399 45.6
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.5e-91 340.1 251 66.1
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 5.1e-89 332.4 213 67.6
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 9.6e-88 328.2 369 45.8
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 2.8e-87 326.6 429 46.2
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.2e-85 321.2 406 40.6
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.7e-82 310.1 389 44.2
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 5.1e-81 305.8 427 43.6
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 9.7e-80 301.6 397 41.6
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 5.3e-78 295.8 398 41.5
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.1e-70 271.6 211 61.6
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 1.6e-66 257.7 178 67.4
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 4.4e-64 249.6 221 57.9
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 1.5e-61 241.1 197 57.9
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 4.2e-59 233.0 212 54.7
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.7e-55 221.1 186 55.9
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 7.7e-53 212.2 137 73.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.2e-45 188.3 128 71.1
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 2.7e-45 187.2 118 74.6
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 1.9e-43 181.0 296 39.9
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.6e-42 177.9 311 36.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 2.3e-36 157.5 107 71.0
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 8.6e-36 155.6 97 71.1
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 7.3e-27 125.9 90 61.1
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 6.8e-25 119.4 137 45.3
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 2.0e-21 107.8 107 53.3
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-14 85.1 86 45.3
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.5e-11 75.1 116 37.9
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 5.2e-09 66.6 42 73.8
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 2.2e-07 61.2 64 50.0


User provided reference genes

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