Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1668 Trochodendron aralioides HOM05D003732 ORTHO05D014000 2.1e-112 409.1 214 100.0
Dinv24812 Davidia involucrata HOM05D003732 ORTHO05D014000 5.7e-49 198.4 135 74.8
Nn3g16769 Nelumbo nucifera HOM05D003732 ORTHO05D014000 3.7e-48 195.7 135 74.8
GSVIVG01007696001 Vitis vinifera HOM05D003732 ORTHO05D014000 4.1e-47 192.2 135 71.1
Aqoxy3G01103 Aquilegia oxysepala HOM05D003732 ORTHO05D014000 5.4e-47 191.8 134 73.1
Haze_07546 Corylus avellana HOM05D003732 ORTHO05D014000 3.8e-45 185.7 134 69.4
Cfa019169 Carpinus fangiana HOM05D003732 ORTHO05D014000 2.1e-43 179.9 134 67.9
CDE07G2061 Ceratophyllum demersum HOM05D003732 ORTHO05D014000 5.2e-42 175.3 135 65.2
HPP92_021842 Vanilla planifolia HOM05D003732 ORTHO05D014000 9.5e-36 154.5 164 51.8
ATR1152G071 Amborella trichopoda HOM05D003732 ORTHO05D014000 2.3e-34 149.8 132 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5018 Anthoceros agrestis HOM05D003732 ORTHO05D014000 8.3e-24 114.8 136 49.3
Pp3c17_6460 Physcomitrium patens HOM05D003732 ORTHO05D014000 1.6e-22 110.5 133 45.9
Pp3c1_29590 Physcomitrium patens HOM05D003732 ORTHO05D004965 7.6e-17 91.7 105 47.6
Nn4g22676 Nelumbo nucifera HOM05D003732 ORTHO05D014000 3.2e-15 86.3 73 64.4
SEGI_38076 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 3.3e-12 76.3 62 56.5
SEGI_14455 Sequoiadendron giganteum HOM05D003732 ORTHO05D014000 4.4e-09 65.9 94 43.6
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 2.9e-08 63.2 96 41.7
BcaB05g24098 Brassica carinata HOM05D003732 ORTHO05D004965 3.8e-08 62.8 97 42.3
Lsat_1_v5_gn_8_76381 Lactuca sativa HOM05D003732 ORTHO05D004965 4.9e-08 62.4 97 41.2
Nitab4.5_0004465g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 4.9e-08 62.4 184 31.5
BcaC09g49713 Brassica carinata HOM05D003732 ORTHO05D004965 6.4e-08 62.0 97 42.3
C01p33680 Brassica napus HOM05D003732 ORTHO05D004965 6.4e-08 62.0 97 42.3
Thhalv10002573m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 1.1e-07 61.2 99 41.4
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 1.1e-07 61.2 97 40.2
A01p26450 Brassica napus HOM05D003732 ORTHO05D004965 1.4e-07 60.8 97 42.3
BolC1t03315H Brassica oleracea HOM05D003732 ORTHO05D004965 1.4e-07 60.8 97 42.3
BraA01t02569Z Brassica rapa HOM05D003732 ORTHO05D004965 1.4e-07 60.8 97 42.3
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 1.4e-07 60.8 97 40.2
Nitab4.5_0004465g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 2.4e-07 60.1 97 40.2
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 3.2e-07 59.7 97 39.2
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 4.2e-07 59.3 97 41.2
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 4.2e-07 59.3 97 39.2
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 5.4e-07 58.9 97 40.2
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 5.4e-07 58.9 97 39.2
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 7.1e-07 58.5 187 31.0
Oeu051855.1 Olea europaea HOM05D003732 ORTHO05D004965 7.1e-07 58.5 97 37.1
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 7.1e-07 58.5 184 31.0
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 9.3e-07 58.2 97 38.1
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 9.3e-07 58.2 97 39.2
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 9.3e-07 58.2 97 39.2
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 9.3e-07 58.2 97 39.2
Aa31LG4G14990 Aethionema arabicum HOM05D003732 ORTHO05D004965 1.2e-06 57.8 97 40.2
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 1.2e-06 57.8 97 36.1
PSO170G1826 Papaver somniferum HOM05D003732 ORTHO05D004965 1.2e-06 57.8 97 39.2
AT3G45770 Arabidopsis thaliana HOM05D003732 ORTHO05D004965 1.6e-06 57.4 97 39.2
AL5G24450 Arabidopsis lyrata HOM05D003732 ORTHO05D004965 2.1e-06 57.0 97 39.2
Carub.0005s1163 Capsella rubella HOM05D003732 ORTHO05D004965 2.1e-06 57.0 97 39.2
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 2.1e-06 57.0 97 36.1
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 2.1e-06 57.0 97 39.2
CARHR149900 Cardamine hirsuta HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 39.2
ClCG03G002100 Citrullus lanatus HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 37.1
Cc01_g11890 Coffea canephora HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 38.1
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 38.1
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 39.2
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 35.1
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 2.7e-06 56.6 97 38.1
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 3.5e-06 56.2 97 39.2
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 3.5e-06 56.2 97 37.1
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 3.5e-06 56.2 97 37.1
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 3.5e-06 56.2 97 39.2
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 4.6e-06 55.8 97 37.1
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 4.6e-06 55.8 97 39.2
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 4.6e-06 55.8 97 37.1
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 6.0e-06 55.5 97 35.1
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 6.0e-06 55.5 97 36.1
Thhalv10025585m.g Eutrema salsugineum HOM05D003732 ORTHO05D004965 6.0e-06 55.5 97 38.1
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 6.0e-06 55.5 97 38.1
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 6.0e-06 55.5 97 36.1
Solyc12g096780.2 Solanum lycopersicum HOM05D003732 ORTHO05D004965 6.0e-06 55.5 132 34.1
Sopen11g030320 Solanum pennellii HOM05D003732 ORTHO05D004965 6.0e-06 55.5 184 31.5
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 7.8e-06 55.1 97 36.1
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 7.8e-06 55.1 97 36.1
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 7.8e-06 55.1 79 36.7
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 7.8e-06 55.1 97 35.1
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 7.8e-06 55.1 97 37.1


User provided reference genes

Program Settings