Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 1.3e-124 449.9 256 100.0
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.2e-37 161.0 89 80.9
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 1.2e-37 161.0 89 80.9
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 4.6e-37 159.1 93 77.4
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 6.0e-37 158.7 89 83.1
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.9e-37 158.3 93 76.3
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.3e-36 157.5 93 76.3
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 1.8e-36 157.1 95 77.9
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 2.3e-36 156.8 89 80.9
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.3e-36 156.8 95 76.8
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 3.0e-36 156.4 87 81.6
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 3.0e-36 156.4 87 81.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 3.9e-36 156.0 95 76.8
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 3.9e-36 156.0 89 82.0
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 5.1e-36 155.6 87 81.6
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 5.1e-36 155.6 89 78.7
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 6.7e-36 155.2 89 79.8
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 6.7e-36 155.2 89 78.7
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 1.5e-35 154.1 89 83.1
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.5e-35 154.1 95 75.8
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 1.5e-35 154.1 95 75.8
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 1.9e-35 153.7 88 79.5
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.9e-35 153.7 93 73.1
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.9e-35 153.7 89 77.5
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 2.5e-35 153.3 101 71.3
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.5e-35 153.3 87 79.3
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 3.3e-35 152.9 87 79.3
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 3.3e-35 152.9 89 77.5
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 4.3e-35 152.5 89 82.0
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 5.6e-35 152.1 89 82.0
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 9.6e-35 151.4 89 78.7
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 9.6e-35 151.4 88 80.7
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 9.6e-35 151.4 86 79.1
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.3e-34 151.0 95 73.7
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.6e-34 150.6 89 78.7
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 2.1e-34 150.2 89 77.5
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 2.1e-34 150.2 88 78.4
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 2.8e-34 149.8 87 78.2
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 3.7e-34 149.4 91 80.2
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 3.7e-34 149.4 89 78.7
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 3.7e-34 149.4 88 78.4
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 4.8e-34 149.1 89 76.4
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 4.8e-34 149.1 89 77.5
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 4.8e-34 149.1 89 76.4
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 4.8e-34 149.1 93 73.1
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.8e-34 149.1 87 79.3
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 6.2e-34 148.7 87 77.0
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 6.2e-34 148.7 90 77.8
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 8.1e-34 148.3 83 79.5
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.1e-33 147.9 89 77.5
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.8e-33 147.1 89 75.3
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 2.4e-33 146.7 103 68.9
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 2.4e-33 146.7 87 79.3
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 4.0e-33 146.0 87 77.0
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 4.0e-33 146.0 89 76.4
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 4.0e-33 146.0 89 76.4
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 5.3e-33 145.6 101 67.3
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 5.3e-33 145.6 89 78.7
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 5.3e-33 145.6 89 76.4
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 6.9e-33 145.2 89 74.2
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 6.9e-33 145.2 89 74.2
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 9.0e-33 144.8 91 76.9
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.5e-32 144.1 89 74.2
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 1.5e-32 144.1 89 76.4
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 1.5e-32 144.1 90 75.6
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 1.5e-32 144.1 89 74.2
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 2.0e-32 143.7 89 75.3
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.0e-32 143.7 89 73.0
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 3.4e-32 142.9 89 73.0
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 4.5e-32 142.5 89 73.0
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 4.5e-32 142.5 89 73.0
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 4.5e-32 142.5 89 73.0
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.3e-31 141.0 95 67.4
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.3e-31 141.0 90 70.0
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 1.7e-31 140.6 89 71.9
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 2.2e-31 140.2 87 73.6
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.9e-31 139.8 89 71.9
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 3.8e-31 139.4 87 72.4
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 4.9e-31 139.0 90 72.2
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 6.4e-31 138.7 89 70.8
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 6.4e-31 138.7 89 71.9
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 6.4e-31 138.7 89 70.8
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.1e-30 137.9 87 71.3
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.1e-30 137.9 87 74.7
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 1.9e-30 137.1 87 71.3
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 5.5e-30 135.6 89 70.8
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.5e-30 135.6 95 66.3
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 5.5e-30 135.6 86 68.6
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 9.3e-30 134.8 83 74.7
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.1e-28 129.0 90 65.6
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 6.7e-28 128.6 72 81.9
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 7.4e-27 125.2 68 83.8
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 9.6e-27 124.8 87 64.4
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 6.2e-26 122.1 89 64.0
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 3.4e-24 116.3 64 79.7
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 3.4e-24 116.3 64 79.7
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 3.4e-24 116.3 84 63.1
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 4.5e-24 115.9 71 74.6
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 2.2e-23 113.6 65 78.5
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 2.9e-23 113.2 93 60.2
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 8.4e-23 111.7 89 61.8
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 1.1e-22 111.3 93 58.1
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 2.1e-21 107.1 87 54.0
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 2.1e-21 107.1 91 61.5
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 3.5e-21 106.3 62 80.6
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 6.0e-21 105.5 71 66.2
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 1.0e-20 104.8 87 55.2
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.3e-20 104.4 87 57.5
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 3.0e-20 103.2 91 60.4
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 3.1e-17 93.2 87 49.4
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.5e-16 90.9 93 55.9
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.0e-16 90.5 88 47.7
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 5.7e-11 72.4 42 81.0
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.7e-10 70.9 53 62.3
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.2e-10 70.5 89 39.3
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 3.1e-09 66.6 51 68.6
VMungo1215G2316 Vigna mungo HOM05D017790 ORTHO05D002759 3.2e-06 56.6 39 61.5


User provided reference genes

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