Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0467 Trochodendron aralioides HOM05D001552 ORTHO05D006640 6.3e-48 193.7 96 100.0
TAR362G0328 Trochodendron aralioides HOM05D001552 ORTHO05D006640 4.9e-24 114.4 67 85.1
TAR636G3539 Trochodendron aralioides HOM05D001552 ORTHO05D006640 1.1e-23 113.2 135 51.1
TAR636G2148 Trochodendron aralioides HOM05D001552 ORTHO05D006640 3.2e-23 111.7 135 51.1
TAR636G3157 Trochodendron aralioides HOM05D001552 ORTHO05D006640 7.8e-22 107.1 85 67.1
MBI05_g36623_MAGBIO Magnolia biondii HOM05D001552 ORTHO05D006640 4.3e-20 101.3 68 75.0
QL07p036368 Quercus lobata HOM05D001552 ORTHO05D006640 7.3e-20 100.5 67 73.1
Sabra16G0106100 Salix brachista HOM05D001552 ORTHO05D006640 2.1e-19 99.0 137 46.7
Haze_20928 Corylus avellana HOM05D001552 ORTHO05D006640 4.7e-19 97.8 68 70.6
Gohir.A04G087200 Gossypium hirsutum HOM05D001552 ORTHO05D006640 4.7e-19 97.8 68 69.1
Gohir.D04G127600 Gossypium hirsutum HOM05D001552 ORTHO05D006640 4.7e-19 97.8 68 69.1
Gorai.012G110600 Gossypium raimondii HOM05D001552 ORTHO05D006640 4.7e-19 97.8 68 69.1
Prupe.6G268400 Prunus persica HOM05D001552 ORTHO05D006640 4.7e-19 97.8 68 72.1
Potri.016G109400 Populus trichocarpa HOM05D001552 ORTHO05D006640 6.2e-19 97.4 137 46.7
COL.COLO4_14636 Corchorus olitorius HOM05D001552 ORTHO05D003294 8.1e-19 97.1 68 69.1
FAN14G4773 Fragaria x ananassa HOM05D001552 ORTHO05D006640 1.1e-18 96.7 129 45.0
Cfa017273 Carpinus fangiana HOM05D001552 ORTHO05D006640 1.4e-18 96.3 68 70.6
Psat7g242120 Pisum sativum HOM05D001552 ORTHO05D006640 1.4e-18 96.3 68 69.1
Atru.chr8.2125 Acer truncatum HOM05D001552 ORTHO05D006640 2.3e-18 95.5 68 69.1
Ciclev10012815m.g Citrus clementina HOM05D001552 ORTHO05D006640 3.1e-18 95.1 68 67.6
Medtr4g019150 Medicago truncatula HOM05D001552 ORTHO05D006640 4.0e-18 94.7 68 70.6
Thecc.05G024400 Theobroma cacao HOM05D001552 ORTHO05D006640 5.2e-18 94.4 68 67.6
VMungo0331G1215 Vigna mungo HOM05D001552 ORTHO05D006640 6.8e-18 94.0 68 67.6
PGR031G3644 Punica granatum HOM05D001552 ORTHO05D006640 8.9e-18 93.6 68 66.2
CANSAT35G0796 Cannabis sativa HOM05D001552 ORTHO05D006640 1.2e-17 93.2 68 67.6
Duzib093G0934 Durio zibethinus HOM05D001552 ORTHO05D006640 1.5e-17 92.8 68 64.7
Dinv35523 Davidia involucrata HOM05D001552 ORTHO05D006640 2.0e-17 92.4 68 66.2
Ca_20105_v3 Cicer arietinum L. HOM05D001552 ORTHO05D006640 2.6e-17 92.0 68 66.2
Nn2g13573 Nelumbo nucifera HOM05D001552 ORTHO05D006640 2.6e-17 92.0 68 66.2
COL.COLO4_14635 Corchorus olitorius HOM05D001552 ORTHO05D006640 3.4e-17 91.7 69 68.1
Lj3g0019847 Lotus japonicus HOM05D001552 ORTHO05D006640 3.4e-17 91.7 66 66.7
FvH4_6g12281 Fragaria vesca HOM05D001552 ORTHO05D006640 4.4e-17 91.3 68 61.8
Sed0010206 Sechium edule HOM05D001552 ORTHO05D006640 5.8e-17 90.9 68 64.7
Cpa.g.sc56.92 Carica papaya HOM05D001552 ORTHO05D006640 7.6e-17 90.5 68 64.7
Ca_20107_v3 Cicer arietinum L. HOM05D001552 ORTHO05D006640 7.6e-17 90.5 130 46.2
Glyma.01G109500 Glycine max HOM05D001552 ORTHO05D006640 7.6e-17 90.5 68 61.8
Oeu030542.1 Olea europaea HOM05D001552 ORTHO05D006640 7.6e-17 90.5 129 45.7
Solyc10g085040.1 Solanum lycopersicum HOM05D001552 ORTHO05D006640 7.6e-17 90.5 68 66.2
FAN05G1644 Fragaria x ananassa HOM05D001552 ORTHO05D006640 2.2e-16 89.0 68 60.3
FAN09G2912 Fragaria x ananassa HOM05D001552 ORTHO05D006640 2.2e-16 89.0 68 60.3
FAN14G3299 Fragaria x ananassa HOM05D001552 ORTHO05D006640 2.2e-16 89.0 68 60.3
RcHm_v2.0_Chr3g0464101 Rosa chinensis HOM05D001552 ORTHO05D006640 2.2e-16 89.0 66 62.1
PGSC0003DMG400041963 Solanum tuberosum HOM05D001552 ORTHO05D006640 2.2e-16 89.0 68 64.7
Lsat_1_v5_gn_5_154760 Lactuca sativa HOM05D001552 ORTHO05D006640 2.9e-16 88.6 68 63.2
Phvul.010G006500 Phaseolus vulgaris HOM05D001552 ORTHO05D006640 2.9e-16 88.6 68 61.8
TWI74G0400 Tripterygium wilfordii HOM05D001552 ORTHO05D006640 2.9e-16 88.6 68 63.2
CsaV3_3G034280 Cucumis sativus L. HOM05D001552 ORTHO05D006640 3.7e-16 88.2 68 61.8
Sopen10g034500 Solanum pennellii HOM05D001552 ORTHO05D006640 3.7e-16 88.2 68 64.7
Aqoxy7G01829 Aquilegia oxysepala HOM05D001552 ORTHO05D006640 4.9e-16 87.8 56 69.6
EL10Ac1g01073 Beta vulgaris HOM05D001552 ORTHO05D006640 4.9e-16 87.8 68 63.2
CSS0039160 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 4.9e-16 87.8 68 61.8
CAN.G502.3 Capsicum annuum HOM05D001552 ORTHO05D006640 4.9e-16 87.8 68 63.2
Manes.09G100772 Manihot esculenta HOM05D001552 ORTHO05D006640 4.9e-16 87.8 62 69.4
HanXRQChr05g0136921 Helianthus annuus HOM05D001552 ORTHO05D006640 8.3e-16 87.0 55 72.7
MELO3C009202.2 Cucumis melo HOM05D001552 ORTHO05D006640 1.1e-15 86.7 68 60.3
Lj2C83T18 Lonicera japonica HOM05D001552 ORTHO05D006640 1.1e-15 86.7 69 63.8
TPR.G8218 Trifolium pratense HOM05D001552 ORTHO05D006640 1.1e-15 86.7 75 61.3
ECA248G1430 Erigeron canadensis HOM05D001552 ORTHO05D006640 1.4e-15 86.3 68 63.2
Nn2g13571 Nelumbo nucifera HOM05D001552 ORTHO05D006640 1.4e-15 86.3 69 65.2
Nitab4.5_0004868g0020 Nicotiana tabacum HOM05D001552 ORTHO05D006640 1.4e-15 86.3 68 58.8
Ah.05g170730 Amaranthus hybridus HOM05D001552 ORTHO05D006640 1.9e-15 85.9 68 60.3
BcaB02g09231 Brassica carinata HOM05D001552 ORTHO05D006640 1.9e-15 85.9 68 60.3
BcaC02g11936 Brassica carinata HOM05D001552 ORTHO05D006640 1.9e-15 85.9 68 60.3
MD12G1158200 Malus domestica HOM05D001552 ORTHO05D006640 1.9e-15 85.9 68 61.8
ClCG10G021690 Citrullus lanatus HOM05D001552 ORTHO05D006640 2.4e-15 85.5 67 61.2
Peaxi162Scf00009g00245 Petunia axillaris HOM05D001552 ORTHO05D006640 2.4e-15 85.5 68 60.3
Peaxi162Scf00009g00246 Petunia axillaris HOM05D001552 ORTHO05D006640 2.4e-15 85.5 69 65.2
BcaNung05975 Brassica carinata HOM05D001552 ORTHO05D006640 3.2e-15 85.1 68 60.3
CSS0041969 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 3.2e-15 85.1 68 60.3
AL4G34940 Arabidopsis lyrata HOM05D001552 ORTHO05D006640 4.1e-15 84.7 68 58.8
Lalb_Chr12g0206741 Lupinus albus HOM05D001552 ORTHO05D006640 5.4e-15 84.3 61 68.9
Nitab4.5_0000652g0130 Nicotiana tabacum HOM05D001552 ORTHO05D006640 5.4e-15 84.3 68 57.4
AT2G37970 Arabidopsis thaliana HOM05D001552 ORTHO05D006640 7.1e-15 84.0 68 57.4
MSTRG.19038 Avicennia marina HOM05D001552 ORTHO05D006640 7.1e-15 84.0 68 60.3
GSVIVG01034028001 Vitis vinifera HOM05D000559 ORTHO05D003606 7.1e-15 84.0 86 54.7
BcaNung06515 Brassica carinata HOM05D001552 ORTHO05D006640 9.2e-15 83.6 64 64.1
A03p20980 Brassica napus HOM05D001552 ORTHO05D006640 9.2e-15 83.6 68 55.9
A04p29110 Brassica napus HOM05D001552 ORTHO05D006640 1.2e-14 83.2 68 58.8
C04p09690 Brassica napus HOM05D001552 ORTHO05D006640 1.2e-14 83.2 68 57.4
BolC4t22576H Brassica oleracea HOM05D001552 ORTHO05D006640 1.2e-14 83.2 68 57.4
A05p08020 Brassica napus HOM05D001552 ORTHO05D006640 1.6e-14 82.8 68 57.4
BraA03t11337Z Brassica rapa HOM05D001552 ORTHO05D006640 1.6e-14 82.8 68 55.9
Sp4g20280 Schrenkiella parvula HOM05D001552 ORTHO05D006640 1.6e-14 82.8 67 59.7
TWI53G1370 Tripterygium wilfordii HOM05D001552 ORTHO05D006640 1.6e-14 82.8 57 64.9
BraA05t19769Z Brassica rapa HOM05D001552 ORTHO05D006640 2.1e-14 82.4 68 55.9
Psat7g242040 Pisum sativum HOM05D001552 ORTHO05D006640 2.1e-14 82.4 69 63.8
BraA04t18381Z Brassica rapa HOM05D001552 ORTHO05D006640 2.7e-14 82.0 68 58.8
Sc07g0006920 Simmondsia chinensis HOM05D001552 ORTHO05D006640 2.7e-14 82.0 68 60.3
BcaB01g03737 Brassica carinata HOM05D001552 ORTHO05D006640 3.5e-14 81.6 68 55.9
Thhalv10017151m.g Eutrema salsugineum HOM05D001552 ORTHO05D006640 3.5e-14 81.6 85 52.9
Aa31sc250G20 Aethionema arabicum HOM05D001552 ORTHO05D006640 4.6e-14 81.3 57 64.9
BcaC01g05581 Brassica carinata HOM05D001552 ORTHO05D006640 4.6e-14 81.3 87 49.4
C03p24640 Brassica napus HOM05D001552 ORTHO05D006640 4.6e-14 81.3 87 49.4
BolC3t14860H Brassica oleracea HOM05D001552 ORTHO05D006640 4.6e-14 81.3 87 49.4
DCAR_010396 Daucus carota HOM05D001552 ORTHO05D006640 4.6e-14 81.3 68 58.8
Sopen10g034490 Solanum pennellii HOM05D001552 ORTHO05D006640 4.6e-14 81.3 68 60.3
PGSC0003DMG400011016 Solanum tuberosum HOM05D001552 ORTHO05D006640 4.6e-14 81.3 68 60.3
BcaC02g11937 Brassica carinata HOM05D001552 ORTHO05D006640 6.0e-14 80.9 68 55.9
BolC4t28138H Brassica oleracea HOM05D001552 ORTHO05D006640 6.0e-14 80.9 68 57.4
Carub.0004s1993 Capsella rubella HOM05D001552 ORTHO05D006640 6.0e-14 80.9 68 55.9
MD04G1144100 Malus domestica HOM05D001552 ORTHO05D006640 6.0e-14 80.9 65 58.5
CARHR132520 Cardamine hirsuta HOM05D001552 ORTHO05D006640 7.8e-14 80.5 68 55.9
C04p66330 Brassica napus HOM05D001552 ORTHO05D006640 1.0e-13 80.1 68 57.4
Medtr4g019130 Medicago truncatula HOM05D001552 ORTHO05D006640 1.0e-13 80.1 69 62.3
SGA_v2.0_scaffold85G26786 Striga asiatica HOM05D001552 ORTHO05D006640 1.0e-13 80.1 68 57.4
THA.LOC109116897 Tarenaya hassleriana HOM05D001552 ORTHO05D006640 1.3e-13 79.7 57 64.9
AUR62027865 Chenopodium quinoa HOM05D001552 ORTHO05D006640 1.7e-13 79.3 68 57.4
PSO384G0489 Papaver somniferum HOM05D001552 ORTHO05D006640 1.7e-13 79.3 73 58.9
AUR62019028 Chenopodium quinoa HOM05D001552 ORTHO05D006640 2.3e-13 79.0 68 58.8
DCAR_012162 Daucus carota HOM05D001552 ORTHO05D006640 3.0e-13 78.6 68 58.8
CSS0049639 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 5.1e-13 77.8 68 57.4
PSO339G5296 Papaver somniferum HOM05D001552 ORTHO05D006640 5.1e-13 77.8 73 56.2
Rhsim05G0203000 Rhododendron simsii HOM05D001552 ORTHO05D006640 8.6e-13 77.0 68 55.9
SEGI_03140 Sequoiadendron giganteum HOM05D001552 ORTHO05D006640 1.5e-12 76.3 57 59.6
Solyc10g085030.1 Solanum lycopersicum HOM05D001552 ORTHO05D006640 1.9e-12 75.9 68 57.4
unitig_8.g3235 Utricularia gibba HOM05D001552 ORTHO05D006640 4.3e-12 74.7 57 61.4
Migut.J00240 Erythranthe guttata HOM05D001552 ORTHO05D006640 1.2e-11 73.2 67 55.2
Os01g0850900 Oryza sativa ssp. japonica HOM05D001552 ORTHO05D006640 1.6e-11 72.8 66 56.1
PGR031G0217 Punica granatum HOM05D001552 ORTHO05D006640 3.1e-10 68.6 68 54.4
SMO144G0034 Selaginella moellendorffii HOM05D001552 ORTHO05D006640 5.2e-10 67.8 58 56.9
CSS0016608 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 2.0e-09 65.9 57 57.9
Zm00001eb367650 Zea mays HOM05D001552 ORTHO05D006640 3.4e-09 65.1 57 54.4
SGA_v2.0_scaffold75G24989 Striga asiatica HOM05D001552 ORTHO05D006640 4.4e-09 64.7 67 47.8
Mapoly0056s0063 Marchantia polymorpha HOM05D001552 ORTHO05D006640 9.9e-09 63.5 57 49.1
Pp3c24_2460 Physcomitrium patens HOM05D001552 ORTHO05D006640 9.9e-09 63.5 56 50.0
Prupe.6G268500 Prunus persica HOM05D001552 ORTHO05D006640 1.4e-07 59.7 65 55.4
AagrBONN_evm.TU.Sc2ySwM_117.527 Anthoceros agrestis HOM05D001552 ORTHO05D006640 2.1e-06 55.8 55 40.0


User provided reference genes

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