Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 4.3e-130 468.0 235 100.0
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 6.5e-54 214.9 158 70.9
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 5.1e-51 205.3 159 66.0
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.2e-49 199.9 140 71.4
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.2e-49 199.9 140 71.4
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 2.8e-49 199.5 149 70.5
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 6.3e-49 198.4 145 71.0
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.1e-48 197.6 133 75.9
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.1e-48 197.6 133 75.9
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 3.1e-48 196.1 164 66.5
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 1.6e-47 193.7 145 69.7
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 4.5e-47 192.2 136 69.1
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.3e-46 190.7 162 63.6
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 1.3e-46 190.7 130 72.3
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 2.9e-46 189.5 148 64.9
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 3.8e-46 189.1 115 81.7
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 3.8e-46 189.1 124 74.2
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 3.8e-46 189.1 124 74.2
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 3.8e-46 189.1 124 74.2
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 5.0e-46 188.7 160 61.2
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 1.9e-45 186.8 150 66.0
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 2.5e-45 186.4 124 73.4
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 3.2e-45 186.0 136 70.6
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 4.2e-45 185.7 135 65.2
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 5.5e-45 185.3 134 73.1
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 7.2e-45 184.9 183 57.9
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 9.4e-45 184.5 124 72.6
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 1.2e-44 184.1 131 71.8
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 1.2e-44 184.1 157 59.2
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 1.6e-44 183.7 124 72.6
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 1.6e-44 183.7 112 81.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 1.6e-44 183.7 153 64.7
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 1.6e-44 183.7 137 71.5
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 1.6e-44 183.7 137 71.5
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 1.6e-44 183.7 137 71.5
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 2.1e-44 183.3 127 72.4
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 2.7e-44 183.0 110 78.2
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 3.6e-44 182.6 131 67.2
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 3.6e-44 182.6 168 61.3
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 4.7e-44 182.2 154 59.7
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 4.7e-44 182.2 140 64.3
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 1.0e-43 181.0 162 63.0
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 1.0e-43 181.0 148 64.9
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 1.0e-43 181.0 145 65.5
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.4e-43 180.6 155 58.1
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.8e-43 180.3 136 69.9
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 4.0e-43 179.1 164 55.5
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 4.0e-43 179.1 150 58.0
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 5.2e-43 178.7 115 73.9
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 6.7e-43 178.3 102 84.3
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 1.1e-42 177.6 132 70.5
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 1.5e-42 177.2 132 66.7
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 1.5e-42 177.2 125 71.2
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 2.6e-42 176.4 132 68.2
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 3.3e-42 176.0 127 67.7
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 4.4e-42 175.6 132 69.7
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 5.7e-42 175.3 143 65.0
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 5.7e-42 175.3 147 61.2
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 7.5e-42 174.9 131 66.4
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 7.5e-42 174.9 147 61.2
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 7.5e-42 174.9 145 62.8
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 7.5e-42 174.9 180 54.4
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 9.7e-42 174.5 115 75.7
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.3e-41 174.1 154 56.5
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 1.3e-41 174.1 126 69.8
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 1.3e-41 174.1 155 57.4
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 2.2e-41 173.3 112 75.9
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.2e-41 173.3 157 57.3
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.2e-41 173.3 157 57.3
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 2.2e-41 173.3 171 56.7
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 2.8e-41 172.9 130 67.7
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 3.7e-41 172.6 125 69.6
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 6.3e-41 171.8 154 55.8
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 6.3e-41 171.8 133 66.2
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 6.3e-41 171.8 115 72.2
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 8.2e-41 171.4 145 61.4
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.1e-40 171.0 127 68.5
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 1.8e-40 170.2 108 73.1
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 4.1e-40 169.1 108 72.2
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 7.0e-40 168.3 120 65.0
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 9.1e-40 167.9 103 76.7
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.2e-39 167.5 109 72.5
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.2e-39 167.5 123 67.5
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.2e-39 167.5 105 77.1
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 1.6e-39 167.2 133 65.4
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 5.9e-39 165.2 122 67.2
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 7.7e-39 164.9 162 53.1
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 1.7e-38 163.7 102 74.5
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 2.2e-38 163.3 108 74.1
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 3.8e-38 162.5 136 60.3
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 6.5e-38 161.8 122 66.4
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 8.5e-38 161.4 109 63.3
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 2.5e-37 159.8 125 65.6
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 5.5e-37 158.7 102 71.6
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.0e-35 154.5 87 85.1
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 1.8e-35 153.7 88 83.0
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.4e-34 149.1 98 75.5
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 1.3e-33 147.5 173 48.6
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 7.0e-32 141.7 87 78.2
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.7e-30 137.1 121 50.4
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.7e-30 137.1 121 50.4
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 5.5e-29 132.1 110 52.7
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.0e-27 127.9 108 56.5
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.8e-24 117.1 112 50.9
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 5.6e-13 79.0 54 68.5
TAR625G0935 Trochodendron aralioides HOM05D005595 ORTHO05D006962 2.9e-09 66.6 72 44.4
TAR369G0511 Trochodendron aralioides HOM05D067606 ORTHO05D051489 7.0e-08 62.0 63 47.6


User provided reference genes

Program Settings