Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0119 Trochodendron aralioides HOM05D006035 ORTHO05D007155 4.2e-44 181.8 161 100.0
TAR633G1133 Trochodendron aralioides HOM05D006035 ORTHO05D007155 7.7e-22 107.8 153 44.4
QL06p012626 Quercus lobata HOM05D006035 ORTHO05D007155 1.7e-21 106.7 161 41.0
Haze_01313 Corylus avellana HOM05D006035 ORTHO05D007155 3.2e-20 102.4 160 39.4
Cfa015301 Carpinus fangiana HOM05D006035 ORTHO05D007155 7.2e-20 101.3 161 39.1
Dinv44276 Davidia involucrata HOM05D006035 ORTHO05D007155 1.8e-18 96.7 153 40.5
MD16G1152300 Malus domestica HOM05D006035 ORTHO05D007155 2.3e-18 96.3 161 39.8
Gohir.A09G234100 Gossypium hirsutum HOM05D006035 ORTHO05D007155 2.0e-17 93.2 165 40.6
Gohir.D09G234900 Gossypium hirsutum HOM05D006035 ORTHO05D007155 2.6e-17 92.8 165 39.4
Actinidia31554 Actinidia chinensis HOM05D006035 ORTHO05D007155 3.3e-17 92.4 157 45.9
CiPaw.01G137000 Carya illinoinensis HOM05D006035 ORTHO05D007155 7.4e-17 91.3 165 38.8
Duzib151G0686 Durio zibethinus HOM05D006035 ORTHO05D007155 9.7e-17 90.9 160 41.2
Gorai.006G257800 Gossypium raimondii HOM05D006035 ORTHO05D007155 9.7e-17 90.9 165 38.8
Thecc.04G302600 Theobroma cacao HOM05D006035 ORTHO05D007155 9.7e-17 90.9 168 38.7
Duzib212G0974 Durio zibethinus HOM05D006035 ORTHO05D007155 1.3e-16 90.5 164 38.4
Rhsim04G0240200 Rhododendron simsii HOM05D006035 ORTHO05D007155 3.7e-16 89.0 159 39.6
RcHm_v2.0_Chr4g0425671 Rosa chinensis HOM05D006035 ORTHO05D007155 3.7e-16 89.0 160 37.5
vmacro08029 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 3.7e-16 89.0 156 39.1
Atru.chr4.3040 Acer truncatum HOM05D006035 ORTHO05D007155 8.2e-16 87.8 163 41.7
COL.COLO4_34598 Corchorus olitorius HOM05D006035 ORTHO05D007155 8.2e-16 87.8 162 38.3
MD13G1151300 Malus domestica HOM05D006035 ORTHO05D007155 1.1e-15 87.4 161 37.3
FvH4_4g19970 Fragaria vesca HOM05D006035 ORTHO05D007155 2.4e-15 86.3 153 36.6
Nn3g21749 Nelumbo nucifera HOM05D006035 ORTHO05D007155 2.4e-15 86.3 164 36.6
Oeu038775.1 Olea europaea HOM05D006035 ORTHO05D007155 5.3e-15 85.1 156 37.2
Psat0s4013g0040 Pisum sativum HOM05D006035 ORTHO05D007155 5.3e-15 85.1 155 36.8
Sabra08G0078500 Salix brachista HOM05D006035 ORTHO05D007155 5.3e-15 85.1 168 35.7
TPR.G25406 Trifolium pratense HOM05D006035 ORTHO05D007155 5.3e-15 85.1 155 35.5
Aqoxy2G02699 Aquilegia oxysepala HOM05D006035 ORTHO05D007155 9.1e-15 84.3 159 35.2
Oeu038777.1 Olea europaea HOM05D006035 ORTHO05D007155 9.1e-15 84.3 155 37.4
PSO761G0247 Papaver somniferum HOM05D006035 ORTHO05D007155 9.1e-15 84.3 162 36.4
Sabra10G0113300 Salix brachista HOM05D006035 ORTHO05D007155 9.1e-15 84.3 168 35.7
Glyma.17G034900 Glycine max HOM05D006035 ORTHO05D007155 1.5e-14 83.6 153 36.6
Rhsim02G0003100 Rhododendron simsii HOM05D006035 ORTHO05D007155 1.5e-14 83.6 154 39.6
Manes.15G000900 Manihot esculenta HOM05D006035 ORTHO05D007155 2.0e-14 83.2 157 63.7
Oeu038773.1 Olea europaea HOM05D006035 ORTHO05D007155 2.6e-14 82.8 152 48.7
Oeu038774.1 Olea europaea HOM05D006035 ORTHO05D007155 2.6e-14 82.8 152 48.7
TWI09G1568 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 2.6e-14 82.8 156 35.9
VMungo1215G2980 Vigna mungo HOM05D006035 ORTHO05D007155 2.6e-14 82.8 157 36.9
FAN07G1803 Fragaria x ananassa HOM05D006035 ORTHO05D007155 3.4e-14 82.4 160 51.9
Potri.008G103900 Populus trichocarpa HOM05D006035 ORTHO05D007155 4.5e-14 82.0 168 34.5
CSS0043064 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 5.9e-14 81.6 160 38.8
ClCG05G006630 Citrullus lanatus HOM05D006035 ORTHO05D007155 1.0e-13 80.9 154 35.7
A09p04840 Brassica napus HOM05D006035 ORTHO05D007155 1.3e-13 80.5 157 34.4
MELO3C006721.2 Cucumis melo HOM05D006035 ORTHO05D007155 1.3e-13 80.5 153 33.3
THA.LOC104818878 Tarenaya hassleriana HOM05D006035 ORTHO05D007155 1.7e-13 80.1 159 35.2
PSO210G7669 Papaver somniferum HOM05D006035 ORTHO05D007155 2.2e-13 79.7 162 35.2
Sed0018605 Sechium edule HOM05D006035 ORTHO05D007155 2.2e-13 79.7 157 36.3
Ciclev10006076m.g Citrus clementina HOM05D006035 ORTHO05D007155 2.9e-13 79.3 165 33.3
Phvul.005G129600 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 3.8e-13 79.0 157 35.0
Potri.010G146900 Populus trichocarpa HOM05D006035 ORTHO05D007155 3.8e-13 79.0 168 34.5
BcaB04g19614 Brassica carinata HOM05D006035 ORTHO05D007155 5.0e-13 78.6 157 33.8
BcaC04g23738 Brassica carinata HOM05D006035 ORTHO05D007155 5.0e-13 78.6 157 33.1
C09p05220 Brassica napus HOM05D006035 ORTHO05D007155 5.0e-13 78.6 157 33.1
PGR031G3428 Punica granatum HOM05D006035 ORTHO05D007155 5.0e-13 78.6 163 41.7
BolC9t53448H Brassica oleracea HOM05D006035 ORTHO05D007155 6.5e-13 78.2 157 33.1
BraA09t36121Z Brassica rapa HOM05D006035 ORTHO05D007155 6.5e-13 78.2 157 33.8
Cpa.g.sc9.45 Carica papaya HOM05D006035 ORTHO05D007155 6.5e-13 78.2 159 66.7
Duzib052G0321 Durio zibethinus HOM05D006035 ORTHO05D007155 6.5e-13 78.2 159 45.3
CANSAT78G2193 Cannabis sativa HOM05D006035 ORTHO05D007155 8.5e-13 77.8 161 34.8
Aa31LG11G8120 Aethionema arabicum HOM05D006035 ORTHO05D007155 1.1e-12 77.4 156 35.3
CsaV3_3G015240 Cucumis sativus L. HOM05D006035 ORTHO05D007155 1.1e-12 77.4 158 34.2
PGR004G1138 Punica granatum HOM05D006035 ORTHO05D007155 1.4e-12 77.0 164 33.5
Lalb_Chr13g0298531 Lupinus albus HOM05D006035 ORTHO05D007155 1.9e-12 76.6 158 32.3
Phvul.003G115800 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 1.9e-12 76.6 157 35.0
Ca_21435_v3 Cicer arietinum L. HOM05D006035 ORTHO05D007155 2.5e-12 76.3 160 34.4
Migut.G00072 Erythranthe guttata HOM05D006035 ORTHO05D007155 2.5e-12 76.3 161 34.2
SGA_v2.0_scaffold64G22102 Striga asiatica HOM05D006035 ORTHO05D007155 2.5e-12 76.3 161 33.5
Lj1g0017970 Lotus japonicus HOM05D006035 ORTHO05D007155 3.2e-12 75.9 162 32.7
Sp2g19800 Schrenkiella parvula HOM05D006035 ORTHO05D007155 4.2e-12 75.5 161 34.2
SpUn0021_0050 Schrenkiella parvula HOM05D006035 ORTHO05D007155 4.2e-12 75.5 161 34.2
Eucgr.H04056 Eucalyptus grandis HOM05D006035 ORTHO05D007155 5.5e-12 75.1 192 37.5
Gohir.A10G173200 Gossypium hirsutum HOM05D006035 ORTHO05D007155 5.5e-12 75.1 162 35.2
Medtr4g122260 Medicago truncatula HOM05D006035 ORTHO05D007155 7.2e-12 74.7 161 33.5
HPP92_008930 Vanilla planifolia HOM05D006035 ORTHO05D007155 7.2e-12 74.7 155 34.2
Glyma.07G238700 Glycine max HOM05D006035 ORTHO05D007155 9.4e-12 74.3 153 34.0
AL8G23240 Arabidopsis lyrata HOM05D006035 ORTHO05D007155 2.7e-11 72.8 158 32.3
MSTRG.10157 Avicennia marina HOM05D006035 ORTHO05D007155 2.7e-11 72.8 153 50.3
CARHR182020 Cardamine hirsuta HOM05D006035 ORTHO05D007155 2.7e-11 72.8 154 34.4
vmacro15178 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 2.7e-11 72.8 154 34.4
CSS0012943 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 3.6e-11 72.4 166 34.9
CSS0018156 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 6.1e-11 71.6 157 61.8
Gorai.011G201000 Gossypium raimondii HOM05D006035 ORTHO05D007155 6.1e-11 71.6 162 33.3
TWI53G1140 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 6.1e-11 71.6 154 33.1
CSS0047932 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 8.0e-11 71.2 166 33.7
AT5G49480 Arabidopsis thaliana HOM05D006035 ORTHO05D007155 1.0e-10 70.9 157 31.2
CAN.G97.9 Capsicum annuum HOM05D006035 ORTHO05D007155 1.4e-10 70.5 163 28.2
DCAR_030462 Daucus carota HOM05D006035 ORTHO05D007155 1.4e-10 70.5 159 32.7
CSS0034436 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 2.3e-10 69.7 162 34.0
SalBow8G4845 Salvia bowleyana HOM05D006035 ORTHO05D007155 2.3e-10 69.7 158 31.6
Gohir.D10G179700 Gossypium hirsutum HOM05D006035 ORTHO05D007155 3.9e-10 68.9 162 33.3
Prupe.1G115600 Prunus persica HOM05D006035 ORTHO05D007155 3.9e-10 68.9 56 62.5
QL06p006093 Quercus lobata HOM05D001729 ORTHO05D001155 6.7e-10 68.2 53 64.2
Lsat_1_v5_gn_1_41620 Lactuca sativa HOM05D006035 ORTHO05D007155 1.1e-09 67.4 153 32.7
Carub.0008s0934 Capsella rubella HOM05D006035 ORTHO05D007155 1.5e-09 67.0 163 65.6
Cc03_g00700 Coffea canephora HOM05D006035 ORTHO05D007155 2.0e-09 66.6 175 39.4
Nitab4.5_0000931g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 2.0e-09 66.6 165 29.7
Lalb_Chr07g0182041 Lupinus albus HOM05D006035 ORTHO05D007155 2.6e-09 66.2 157 30.6
Oeu042670.1 Olea europaea HOM05D006035 ORTHO05D007155 5.7e-09 65.1 160 32.5
PGSC0003DMG400001204 Solanum tuberosum HOM05D006035 ORTHO05D007155 5.7e-09 65.1 159 29.6
Sopen01g024580 Solanum pennellii HOM05D006035 ORTHO05D007155 9.7e-09 64.3 159 29.6
Hma1.2p1_0013F.1_g008420 Hydrangea macrophylla HOM05D006035 ORTHO05D007155 2.2e-08 63.2 167 33.5
EL10Ac3g05523 Beta vulgaris HOM05D006035 ORTHO05D007155 4.8e-08 62.0 163 29.4
Nitab4.5_0000655g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 4.8e-08 62.0 44 63.6
ECA246G4755 Erigeron canadensis HOM05D006035 ORTHO05D007155 2.4e-07 59.7 153 30.7
Peaxi162Scf00228g00041 Petunia axillaris HOM05D006035 ORTHO05D007155 2.4e-07 59.7 52 51.9
GSVIVG01034916001 Vitis vinifera HOM05D006035 ORTHO05D007155 4.1e-07 58.9 39 64.1
HanXRQChr05g0146001 Helianthus annuus HOM05D006035 ORTHO05D007155 5.3e-07 58.5 153 28.8
HanXRQChr11g0353881 Helianthus annuus HOM05D006035 ORTHO05D007155 5.3e-07 58.5 153 30.7
Manes.03G205900 Manihot esculenta HOM05D006035 ORTHO05D007155 7.0e-07 58.2 147 26.5
Solyc01g058720.4 Solanum lycopersicum HOM05D006035 ORTHO05D007155 3.5e-06 55.8 45 60.0
unitig_32.g11850 Utricularia gibba HOM05D006035 ORTHO05D007155 4.5e-06 55.5 157 28.7
Lj6P692T31 Lonicera japonica HOM05D006035 ORTHO05D007155 5.9e-06 55.1 37 67.6
MD04G1036600 Malus domestica HOM05D006035 ORTHO05D007155 5.9e-06 55.1 41 63.4
Sc19g0003080 Simmondsia chinensis HOM05D006035 ORTHO05D007155 5.9e-06 55.1 158 25.9
Os03g0310800 Oryza sativa ssp. japonica HOM05D006035 ORTHO05D007155 7.7e-06 54.7 52 51.9


User provided reference genes

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