Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 5.7e-245 850.5 436 100.0
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 3.8e-209 731.5 436 87.4
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.2e-205 719.9 437 85.6
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.7e-204 716.1 437 84.9
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.7e-201 706.1 437 84.0
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.7e-201 706.1 462 81.0
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 6.6e-201 704.1 437 83.8
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 9.5e-200 700.3 438 83.1
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.1e-199 699.1 437 84.2
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.2e-197 693.3 438 83.3
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.5e-197 693.0 438 82.9
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.0e-197 692.6 438 83.3
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 2.8e-183 645.6 441 76.6
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.5e-157 560.1 462 64.9
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 1.0e-116 424.5 472 49.8
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.1e-110 404.4 480 49.0
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 8.5e-108 394.8 460 50.4
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.1e-107 394.4 465 49.5
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 2.5e-107 393.3 463 49.2
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 2.7e-106 389.8 464 48.3
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 8.0e-106 388.3 469 47.3
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 2.3e-105 386.7 465 47.7
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.1e-104 384.4 468 47.9
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.3e-103 380.9 479 45.3
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.3e-103 380.9 471 48.4
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 2.2e-103 380.2 452 48.0
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 2.8e-103 379.8 473 46.9
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 5.0e-100 369.0 454 46.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 2.5e-99 366.7 462 47.2
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 5.5e-99 365.5 460 45.4
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 9.4e-99 364.8 465 45.2
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 9.4e-99 364.8 455 46.8
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 6.1e-98 362.1 462 45.2
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.8e-97 360.5 466 45.3
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 3.0e-97 359.8 480 45.6
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.0e-97 359.4 468 44.0
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 2.6e-96 356.7 462 45.2
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 3.4e-96 356.3 470 44.7
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 4.4e-96 355.9 468 43.8
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.4e-94 350.9 456 46.1
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.8e-94 350.5 430 46.5
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.2e-93 347.8 453 45.9
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 1.2e-93 347.8 465 44.3
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.9e-93 345.5 455 45.5
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 2.2e-92 343.6 487 43.1
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 6.5e-92 342.0 451 44.6
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 1.9e-91 340.5 464 44.4
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.6e-90 336.3 468 42.3
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 8.0e-90 335.1 467 44.1
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 1.5e-88 330.9 487 40.9
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.0e-88 330.5 442 45.0
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 2.6e-88 330.1 478 42.9
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 9.8e-88 328.2 466 41.0
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.7e-87 327.4 466 41.2
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.7e-87 327.4 469 42.0
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 6.3e-87 325.5 474 42.0
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 2.0e-85 320.5 464 41.8
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 4.5e-85 319.3 460 42.2
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 4.5e-85 319.3 445 42.5
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.7e-84 317.4 460 41.1
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 3.8e-84 316.2 452 42.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 5.5e-83 312.4 418 44.5
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 3.6e-82 309.7 462 41.1
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.4e-81 307.8 410 45.1
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 6.8e-81 305.4 442 43.0
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 5.7e-80 302.4 402 43.3
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 5.7e-80 302.4 462 41.6
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 5.7e-80 302.4 471 40.3
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 1.3e-79 301.2 440 41.8
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 3.7e-79 299.7 437 42.6
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.4e-78 297.7 460 38.9
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.8e-78 297.4 478 38.7
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 4.1e-78 296.2 444 42.3
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 9.2e-78 295.0 462 39.2
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 9.2e-78 295.0 413 42.9
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.0e-77 293.9 467 40.0
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.0e-76 291.6 463 41.3
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.0e-76 291.6 471 39.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.3e-76 290.4 464 39.7
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 5.0e-76 289.3 437 41.4
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 3.6e-74 283.1 342 47.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.3e-73 280.4 447 39.4
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 3.1e-73 280.0 439 39.0
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 5.2e-73 279.3 455 38.0
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.2e-72 278.1 332 47.9
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.5e-72 277.7 468 38.2
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.5e-72 277.7 338 48.5
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 9.8e-72 275.0 450 40.2
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.7e-71 274.2 465 39.8
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 1.1e-70 271.6 455 37.1
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 2.7e-69 266.9 447 36.0
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 2.0e-64 250.8 451 37.9
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.2e-61 241.5 444 35.1
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.8e-58 230.3 304 43.4
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 6.2e-58 229.2 301 45.2
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 5.8e-56 222.6 452 35.4
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.5e-51 207.2 330 39.7
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 4.2e-46 189.9 318 39.9
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.7e-36 157.9 344 33.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 7.3e-35 152.5 182 44.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 5.1e-28 129.8 222 37.8
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.6e-27 126.3 121 52.1
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 7.4e-27 125.9 139 47.5
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.8e-26 123.2 121 51.2
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.8e-26 123.2 121 51.2
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.2e-22 110.5 130 46.9
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.7e-20 102.8 130 45.4
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.1e-19 102.1 428 25.5
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 2.1e-18 97.8 403 23.6
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 2.1e-18 97.8 478 24.3
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.2e-16 92.0 162 35.2
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.2e-16 92.0 162 35.2
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.4e-16 90.5 79 57.0
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 5.9e-16 89.7 193 33.2
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 2.9e-15 87.4 107 42.1
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 8.4e-15 85.9 74 55.4
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 4.6e-13 80.1 235 31.1
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.3e-10 72.0 82 42.7
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.5e-08 65.1 120 32.5
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 5.9e-08 63.2 55 54.5
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 2.2e-07 61.2 116 31.0


User provided reference genes

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