Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 2.3e-88 328.9 176 100.0
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 7.0e-77 290.8 178 88.8
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 2.7e-76 288.9 179 88.3
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 2.7e-76 288.9 179 88.3
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 2.7e-76 288.9 179 88.3
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 3.5e-76 288.5 180 87.2
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 4.5e-76 288.1 179 88.8
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 3.4e-71 271.9 175 85.7
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 9.1e-69 263.8 177 82.5
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 5.5e-66 254.6 178 79.8
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 2.0e-63 246.1 177 78.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.0e-51 205.7 171 67.3
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 5.6e-50 201.4 173 65.3
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 4.4e-47 191.8 116 81.9
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.9e-45 186.4 114 80.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.9e-45 186.4 114 80.7
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 3.2e-45 185.7 157 65.6
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 5.4e-45 184.9 110 82.7
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 9.2e-45 184.1 106 84.9
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 9.2e-45 184.1 114 80.7
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 9.2e-45 184.1 131 71.8
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.2e-44 183.7 109 84.4
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.6e-44 183.3 112 81.2
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 1.6e-44 183.3 130 72.3
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.0e-44 183.0 109 84.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.7e-44 182.6 153 64.1
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 2.7e-44 182.6 110 83.6
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.5e-44 182.2 109 84.4
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.6e-44 181.8 118 78.8
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 6.0e-44 181.4 109 83.5
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 7.8e-44 181.0 127 74.8
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 7.8e-44 181.0 115 79.1
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 7.8e-44 181.0 109 81.7
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.0e-43 180.6 109 81.7
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.0e-43 180.6 109 81.7
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.3e-43 180.3 107 83.2
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.7e-43 179.9 109 78.9
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 1.7e-43 179.9 117 79.5
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.3e-43 179.5 172 60.5
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.3e-43 179.5 111 81.1
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 3.0e-43 179.1 111 80.2
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 3.0e-43 179.1 108 80.6
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 3.0e-43 179.1 109 81.7
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 3.0e-43 179.1 117 81.2
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 3.9e-43 178.7 109 79.8
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 3.9e-43 178.7 114 77.2
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 3.9e-43 178.7 99 88.9
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 3.9e-43 178.7 108 80.6
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 3.9e-43 178.7 115 78.3
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 5.0e-43 178.3 138 67.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 5.0e-43 178.3 106 84.0
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.0e-43 178.3 109 80.7
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 8.6e-43 177.6 120 76.7
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 8.6e-43 177.6 114 75.4
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 8.6e-43 177.6 114 75.4
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 8.6e-43 177.6 114 75.4
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 8.6e-43 177.6 109 78.9
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 8.6e-43 177.6 142 70.4
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 8.6e-43 177.6 107 80.4
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.1e-42 177.2 147 66.0
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 1.1e-42 177.2 109 79.8
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.1e-42 177.2 138 67.4
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.1e-42 177.2 109 81.7
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.1e-42 177.2 133 69.2
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.9e-42 176.4 145 68.3
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.9e-42 176.4 111 80.2
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 3.3e-42 175.6 112 76.8
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 4.3e-42 175.3 118 78.0
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 4.3e-42 175.3 137 67.2
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 4.3e-42 175.3 115 77.4
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 5.6e-42 174.9 111 80.2
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 7.3e-42 174.5 115 75.7
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 7.3e-42 174.5 123 72.4
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 7.3e-42 174.5 177 55.4
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 7.3e-42 174.5 109 78.9
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 9.5e-42 174.1 110 77.3
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 9.5e-42 174.1 164 58.5
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.2e-41 173.7 111 78.4
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.6e-41 173.3 106 77.4
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.6e-41 173.3 106 77.4
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 1.6e-41 173.3 112 78.6
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.1e-41 172.9 111 75.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.8e-41 172.6 109 78.9
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.8e-41 172.6 114 73.7
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 2.8e-41 172.6 109 78.0
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.8e-41 172.6 112 75.9
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 4.7e-41 171.8 111 79.3
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 6.2e-41 171.4 109 78.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 8.1e-41 171.0 109 78.9
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 8.1e-41 171.0 109 78.0
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.1e-40 170.6 118 72.0
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.1e-40 170.6 103 79.6
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 4.0e-40 168.7 109 73.4
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 6.8e-40 167.9 102 80.4
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.2e-39 167.2 103 79.6
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 7.5e-39 164.5 102 79.4
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.2e-38 162.9 111 73.0
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.9e-38 162.5 146 61.0
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 3.7e-38 162.2 109 75.2
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.4e-38 161.4 147 61.2
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 8.3e-38 161.0 102 75.5
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 2.8e-33 146.0 174 49.4
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 4.7e-33 145.2 89 80.9
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.1e-32 144.1 112 61.6
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 1.8e-32 143.3 157 50.3
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 5.2e-32 141.7 139 54.7
BcaC02g10904 Brassica carinata HOM05D006938 ORTHO05D008600 6.0e-28 128.3 138 61.6
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 6.0e-28 128.3 69 88.4
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.3e-27 127.1 112 54.5
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.7e-27 126.7 74 82.4
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 6.9e-24 114.8 63 92.1
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 4.6e-20 102.1 93 51.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.1e-16 90.9 63 73.0
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.8e-16 90.1 54 81.5
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 5.8e-15 85.1 74 52.7
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 9.9e-15 84.3 44 90.9
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 6.0e-12 75.1 44 79.5
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.1e-10 70.9 52 63.5


User provided reference genes

Program Settings