Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.4e-185 652.9 350 100.0
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 9.7e-179 630.2 350 95.4
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 1.3e-178 629.8 350 95.4
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 5.1e-172 607.8 350 94.0
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 1.1e-171 606.7 348 94.0
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 5.7e-171 604.4 348 93.7
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.3e-170 603.2 350 92.9
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 5.5e-150 534.6 301 95.3
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 4.1e-145 518.5 331 83.7
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.0e-143 513.8 296 94.3
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 2.8e-133 479.2 441 65.1
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.0e-132 477.2 346 73.1
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 9.8e-131 470.7 344 74.4
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 1.3e-130 470.3 340 72.9
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.7e-130 469.9 341 73.3
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 3.7e-130 468.8 349 72.2
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 5.4e-129 464.9 347 72.6
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 1.6e-128 463.4 346 71.1
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 1.3e-127 460.3 348 72.4
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 1.5e-126 456.8 343 71.1
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 3.3e-126 455.7 333 73.9
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 4.3e-126 455.3 347 71.2
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.2e-125 453.8 350 70.3
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 1.6e-125 453.4 338 72.2
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 2.8e-125 452.6 338 72.5
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 3.0e-124 449.1 330 73.3
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 3.0e-124 449.1 330 73.3
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.5e-123 446.8 346 69.4
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 2.9e-122 442.6 346 70.2
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 6.4e-122 441.4 341 70.1
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 6.4e-122 441.4 346 69.4
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.9e-121 439.9 350 69.1
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 3.2e-121 439.1 347 70.0
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 5.4e-121 438.3 346 68.8
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 7.0e-121 438.0 341 69.5
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 1.7e-119 433.3 420 58.1
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 2.3e-119 433.0 350 69.1
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 2.3e-119 433.0 326 71.5
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 2.3e-119 433.0 339 66.4
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 2.3e-119 433.0 341 69.2
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 3.9e-119 432.2 339 66.1
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 5.0e-119 431.8 348 67.5
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 1.9e-118 429.9 347 67.4
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 7.3e-118 427.9 325 68.6
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 1.6e-117 426.8 345 66.7
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 2.1e-117 426.4 344 66.9
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 2.8e-117 426.0 341 68.3
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 8.0e-117 424.5 325 69.5
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 4.0e-116 422.2 346 66.5
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 2.0e-115 419.9 347 66.9
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 7.5e-115 417.9 348 66.1
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 7.5e-115 417.9 344 66.6
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.3e-114 417.2 341 67.2
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 3.7e-114 415.6 349 65.6
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.9e-113 413.3 339 64.9
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 4.1e-113 412.1 349 65.3
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 4.1e-113 412.1 344 63.1
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 7.0e-113 411.4 349 65.0
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 9.2e-113 411.0 344 64.0
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 9.2e-113 411.0 344 63.4
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 2.1e-112 409.8 348 65.2
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 3.5e-112 409.1 378 62.7
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 3.5e-112 409.1 347 64.8
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 4.6e-112 408.7 343 65.0
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 1.3e-111 407.1 345 65.2
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 1.3e-111 407.1 339 63.7
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 6.6e-111 404.8 344 65.4
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 8.6e-111 404.4 374 61.2
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 1.1e-110 404.1 340 65.0
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 9.5e-110 401.0 303 70.6
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 2.3e-108 396.4 345 62.6
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 3.1e-108 396.0 346 62.1
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 3.1e-108 396.0 321 67.6
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 6.8e-108 394.8 337 64.7
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 2.6e-107 392.9 293 72.4
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 9.9e-107 391.0 350 62.9
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 1.7e-106 390.2 341 63.3
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 2.2e-106 389.8 296 69.6
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 2.9e-106 389.4 344 62.8
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 4.9e-106 388.7 344 60.5
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 1.1e-105 387.5 346 63.0
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 1.4e-105 387.1 346 62.1
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 2.4e-105 386.3 350 61.1
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 3.2e-105 386.0 346 61.8
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 9.2e-105 384.4 326 63.8
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 9.2e-105 384.4 333 62.8
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 2.1e-104 383.3 334 64.1
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.3e-103 380.6 345 61.2
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 8.6e-103 377.9 285 71.2
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 1.5e-102 377.1 347 61.4
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 2.1e-101 373.2 293 69.6
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 2.8e-101 372.9 317 65.9
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.2e-99 367.5 341 58.1
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 2.2e-98 363.2 367 58.9
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 5.1e-95 352.1 289 68.9
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 2.5e-94 349.7 285 68.4
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 8.1e-93 344.7 339 56.9
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 2.4e-92 343.2 332 57.8
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 9.0e-92 341.3 403 52.4
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 2.0e-91 340.1 268 69.0
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 7.1e-89 331.6 349 55.6
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 4.6e-88 328.9 339 56.0
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 2.3e-87 326.6 336 56.0
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 1.4e-84 317.4 346 52.0
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.5e-83 313.9 399 48.4
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.5e-83 313.9 341 52.5
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 5.8e-83 312.0 390 52.3
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 1.3e-82 310.8 230 72.2
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 4.2e-81 305.8 235 67.2
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.6e-80 303.9 409 47.4
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 2.1e-80 303.5 258 64.3
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 9.0e-76 288.1 243 66.7
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 9.3e-73 278.1 254 61.4
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 3.9e-71 272.7 222 64.9
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 8.7e-71 271.6 246 61.4
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 1.5e-70 270.8 277 57.8
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 5.8e-67 258.8 322 44.4
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 1.4e-65 254.2 304 50.3
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.4e-60 237.7 348 42.0
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.2e-59 234.6 326 42.9
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 4.5e-59 232.6 175 71.4
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 1.2e-56 224.6 205 60.5
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 4.6e-56 222.6 235 52.8
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 2.4e-52 210.3 219 53.9
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 9.4e-49 198.4 135 79.3
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 3.7e-45 186.4 148 64.2
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 1.5e-43 181.0 195 53.3
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 7.7e-43 178.7 147 61.9
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 6.5e-42 175.6 163 62.6
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.1e-36 156.4 121 66.1
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 1.0e-34 151.8 328 32.6
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 7.2e-33 145.6 99 78.8
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.2e-32 144.8 99 75.8
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 5.3e-28 129.4 118 64.4
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 2.0e-22 110.9 77 72.7
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.7e-18 97.8 181 39.8
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 2.3e-18 97.4 219 32.4
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 2.3e-18 97.4 106 52.8
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 4.4e-14 83.2 56 71.4
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 1.7e-13 81.3 78 57.7
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 2.8e-13 80.5 52 80.8
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 1.6e-11 74.7 90 48.9
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 2.7e-11 73.9 70 54.3
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 1.3e-10 71.6 53 69.8
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 2.5e-09 67.4 50 68.0
CAN.G2458.1 Capsicum annuum HOM05D002335 ORTHO05D006282 2.1e-08 64.3 74 52.7


User provided reference genes

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