Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 3.3e-144 515.0 257 100.0
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.8e-129 466.1 257 91.4
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 1.7e-124 449.5 257 88.3
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 2.2e-124 449.1 257 88.3
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 2.2e-124 449.1 257 88.3
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.1e-123 446.8 257 87.9
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 4.2e-123 444.9 258 88.0
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 5.5e-123 444.5 257 87.5
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 6.1e-122 441.0 258 86.8
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.5e-120 436.4 259 87.3
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 3.7e-119 431.8 257 86.0
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.8e-113 412.9 258 82.9
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 1.6e-101 373.2 263 74.1
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 6.6e-84 314.7 257 64.6
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.6e-66 256.9 192 65.1
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 1.8e-65 253.4 238 56.7
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 1.8e-65 253.4 194 63.9
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.2e-64 250.8 201 59.7
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.2e-64 250.8 201 59.7
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 5.8e-64 248.4 191 63.4
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 9.9e-64 247.7 198 62.6
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 9.9e-64 247.7 243 54.7
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.3e-63 247.3 195 62.1
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.3e-63 247.3 192 60.9
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.2e-63 246.5 223 60.1
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 2.9e-63 246.1 255 52.2
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 2.9e-63 246.1 223 59.6
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 3.8e-63 245.7 196 63.3
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 6.4e-63 245.0 196 63.3
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.4e-63 245.0 196 63.3
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 8.4e-63 244.6 192 62.5
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.1e-62 244.2 194 61.9
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-62 243.8 196 62.8
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.9e-62 243.4 196 62.8
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-62 243.0 196 62.8
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 2.4e-62 243.0 198 59.6
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 4.2e-62 242.3 196 62.2
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 5.4e-62 241.9 210 60.5
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 5.4e-62 241.9 192 62.5
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.2e-61 240.7 195 61.0
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 1.6e-61 240.4 198 60.6
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.7e-61 239.6 241 51.9
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.7e-61 239.6 196 62.2
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.7e-61 239.6 225 54.2
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 4.6e-61 238.8 199 59.8
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.6e-61 238.8 196 62.2
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 7.8e-61 238.0 219 58.0
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.0e-60 237.7 206 58.7
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 1.0e-60 237.7 198 60.1
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.3e-60 237.3 199 59.8
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.3e-60 237.3 214 56.5
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 2.3e-60 236.5 242 54.1
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.3e-60 236.5 200 59.0
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 3.0e-60 236.1 193 60.1
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 6.6e-60 235.0 195 59.5
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.1e-59 234.2 196 59.7
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.1e-59 234.2 206 58.3
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.9e-59 233.4 206 57.3
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 3.3e-59 232.6 236 52.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 4.3e-59 232.3 204 57.4
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 4.3e-59 232.3 218 52.3
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 9.6e-59 231.1 191 60.2
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.3e-58 230.7 196 60.2
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 2.1e-58 229.9 204 56.4
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 6.2e-58 228.4 198 58.6
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 8.1e-58 228.0 202 57.4
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.1e-58 228.0 225 53.3
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.1e-57 227.6 203 57.6
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 1.8e-57 226.9 252 51.6
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 4.0e-57 225.7 192 58.3
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 5.3e-57 225.3 199 57.3
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 6.9e-57 224.9 222 52.3
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.2e-56 224.2 201 56.2
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.5e-56 223.8 194 58.2
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.6e-56 223.0 192 58.3
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 2.6e-56 223.0 225 52.0
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 5.8e-56 221.9 196 55.6
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 5.8e-56 221.9 212 54.7
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 9.9e-56 221.1 230 53.5
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 9.9e-56 221.1 225 51.6
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.2e-55 219.9 203 56.7
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.8e-55 219.2 218 53.2
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 6.4e-55 218.4 197 58.4
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 6.4e-55 218.4 191 58.1
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 6.4e-55 218.4 233 49.8
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.1e-54 217.6 245 49.0
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.9e-54 216.9 157 65.0
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.8e-52 210.3 194 54.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.5e-51 207.2 207 52.2
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.3e-51 205.7 225 49.3
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 7.4e-51 204.9 240 47.5
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 4.0e-49 199.1 194 51.5
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.5e-48 197.2 207 54.1
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 2.4e-46 189.9 196 53.1
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 5.5e-46 188.7 198 52.5
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 6.0e-45 185.3 145 63.4
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 7.4e-43 178.3 146 59.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.3e-42 177.6 245 43.7
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.3e-41 172.2 223 42.2
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 2.6e-40 169.9 185 45.9
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 3.2e-38 162.9 187 44.9
BcaC08g45742 Brassica carinata HOM05D006270 ORTHO05D007755 9.7e-35 151.4 108 75.0
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.3e-34 151.0 172 50.0
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 4.5e-32 142.5 127 59.8
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 4.5e-32 142.5 127 60.6
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 5.0e-31 139.0 151 52.3
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.9e-30 137.1 132 52.3
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 7.2e-30 135.2 144 52.8
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 9.3e-30 134.8 117 58.1
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 2.1e-29 133.7 166 43.4
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 3.0e-28 129.8 149 49.7
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.9e-27 127.1 118 53.4
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 2.6e-24 116.7 133 45.9
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.0e-20 103.2 109 48.6
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 3.9e-20 102.8 216 35.2
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 6.7e-20 102.1 147 42.2
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.1e-19 101.3 185 33.0
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 3.7e-18 96.3 69 66.7
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.2e-18 95.1 126 46.0
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-16 91.3 107 43.9
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.3e-15 87.8 65 64.6
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.1e-14 84.7 99 45.5
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 6.3e-10 68.9 46 65.2
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 4.2e-06 56.2 84 34.5
Cre13.g581150 Chlamydomonas reinhardtii HOM05D005733 ORTHO05D006928 9.4e-06 55.1 89 38.2


User provided reference genes

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