Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 0.0e+00 1635.2 902 100.0
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 0.0e+00 1357.0 916 84.2
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 0.0e+00 1340.1 915 82.4
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 0.0e+00 1336.2 909 82.9
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 0.0e+00 1320.8 920 82.6
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 0.0e+00 1307.7 913 82.3
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 0.0e+00 1263.4 903 77.9
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 0.0e+00 1258.4 890 78.9
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 0.0e+00 1254.6 902 77.6
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 0.0e+00 1235.3 915 76.6
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 0.0e+00 1127.1 909 70.5
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 0.0e+00 1109.0 903 73.5
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 5.2e-309 1064.3 945 65.6
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 3.5e-273 945.3 954 59.7
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 3.0e-264 915.6 941 57.1
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 7.3e-263 911.0 945 57.2
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.0e-260 902.9 935 56.8
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 4.4e-260 901.7 935 56.9
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 7.1e-258 894.4 934 56.1
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 1.4e-253 880.2 926 56.3
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 3.1e-253 879.0 921 57.4
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.1e-253 879.0 950 57.5
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 3.4e-252 875.5 944 56.1
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.2e-249 867.1 939 55.8
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 1.6e-249 866.7 948 55.3
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 2.7e-249 865.9 941 56.9
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.6e-246 856.7 934 55.1
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 2.8e-246 855.9 941 57.1
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 4.8e-246 855.1 947 56.2
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 6.2e-246 854.7 988 53.2
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 1.5e-244 850.1 979 53.0
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 9.3e-242 840.9 943 56.4
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.1e-239 833.9 936 53.8
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 1.9e-239 833.2 958 56.1
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 1.1e-237 827.4 932 54.9
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 3.4e-236 822.4 952 53.3
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 3.4e-236 822.4 937 52.9
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 5.8e-236 821.6 943 55.4
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 1.3e-235 820.5 921 54.2
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 5.5e-234 815.1 897 53.8
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 3.5e-233 812.4 932 52.7
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.0e-232 810.8 890 54.3
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 3.9e-232 808.9 923 53.3
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 8.7e-232 807.7 888 55.0
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 1.5e-231 807.0 1066 49.0
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 4.3e-231 805.4 928 53.2
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.3e-231 805.4 889 54.1
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 1.5e-228 797.0 949 51.4
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 2.6e-228 796.2 939 53.8
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 5.8e-228 795.0 905 53.1
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 1.0e-227 794.3 949 54.1
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 3.8e-227 792.3 937 52.9
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 3.8e-227 792.3 946 52.9
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 4.9e-227 792.0 929 54.9
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.9e-226 790.0 869 56.3
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.9e-226 790.0 941 52.4
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 1.2e-225 787.3 929 51.9
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 1.6e-225 786.9 945 51.7
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 2.1e-225 786.6 945 52.7
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 4.6e-225 785.4 932 52.8
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 1.0e-224 784.3 931 52.4
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 3.0e-224 782.7 934 54.0
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 3.0e-224 782.7 889 54.3
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 8.7e-224 781.2 943 53.3
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 2.5e-223 779.6 932 52.8
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 4.3e-223 778.9 962 52.4
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 4.3e-223 778.9 941 52.7
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 1.6e-222 776.9 891 53.3
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.4e-221 773.9 950 52.1
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 5.3e-221 771.9 953 51.6
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 1.5e-220 770.4 852 54.9
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 1.9e-218 763.5 921 52.4
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 7.2e-218 761.5 937 50.5
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 3.6e-217 759.2 961 51.9
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 1.0e-216 757.7 930 50.5
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 2.3e-216 756.5 935 50.3
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 5.1e-216 755.4 925 51.7
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 3.3e-215 752.7 934 52.0
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 7.4e-215 751.5 941 52.2
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.6e-214 750.4 941 50.4
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 4.8e-214 748.8 949 50.1
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 9.0e-213 744.6 940 51.3
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 2.0e-212 743.4 952 49.2
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.7e-211 740.3 928 51.4
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 2.9e-211 739.6 931 51.6
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 5.5e-210 735.3 932 48.9
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 1.8e-205 720.3 1017 48.5
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 5.3e-205 718.8 944 48.6
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 5.3e-205 718.8 886 51.4
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 7.7e-204 714.9 937 50.8
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.5e-203 711.8 857 52.3
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.1e-202 711.1 962 48.1
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 2.6e-191 673.3 874 49.5
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 7.0e-181 638.6 808 51.0
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.3e-163 581.3 949 44.2
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 2.0e-156 557.4 442 62.0
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 7.3e-154 548.9 926 42.3
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 1.1e-149 535.0 977 39.6
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 3.8e-142 510.0 393 64.6
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 1.8e-136 491.1 685 46.9
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 1.7e-118 431.4 586 50.2
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.2e-116 425.2 611 47.0
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.3e-107 394.4 627 47.2
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 2.2e-105 387.9 515 50.3
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 1.4e-104 385.2 910 35.9
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 2.4e-88 331.3 614 39.4
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.8e-81 307.8 492 43.3
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.3e-81 306.6 263 58.9
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 2.0e-63 248.4 261 52.1
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.3e-62 245.7 261 51.3
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 5.0e-62 243.8 936 28.3
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.6e-60 237.7 192 62.5
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.6e-58 231.5 331 51.7
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 4.3e-53 214.2 312 48.1
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.9e-49 201.4 322 44.4
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 5.4e-48 197.2 305 45.6
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 1.7e-46 192.2 1154 25.4
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.8e-44 184.9 403 39.5
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 5.4e-40 170.6 366 39.1
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 1.7e-30 139.0 92 81.5
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 8.6e-30 136.7 92 80.4
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 3.3e-29 134.8 326 40.5
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 3.3e-29 134.8 99 65.7
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 8.9e-27 126.7 114 58.8
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 1.2e-26 126.3 655 24.0
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 9.9e-26 123.2 107 62.6
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.2e-25 122.1 96 67.7
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.4e-24 119.4 84 75.0
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 1.4e-24 119.4 111 56.8
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.4e-24 119.4 135 48.9
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 7.1e-24 117.1 132 47.0
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.2e-23 116.3 253 39.1
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 2.8e-20 105.1 744 24.2
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 1.4e-19 102.8 340 34.7
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.2e-17 95.5 114 51.8
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 3.5e-15 88.2 72 65.3
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.5e-13 82.0 69 65.2
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 4.3e-13 81.3 246 33.3
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.3e-12 79.7 56 73.2
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.4e-11 75.5 58 69.0
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 1.2e-10 73.2 204 27.9
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 1.2e-10 73.2 58 62.1
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.7e-09 69.3 58 67.2
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.7e-09 69.3 95 47.4
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.2e-07 63.2 51 64.7
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.3e-06 58.9 77 45.5
ATR0735G001 Amborella trichopoda HOM05D004844 ORTHO05D006036 3.0e-06 58.5 64 50.0


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