Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 4.6e-136 488.0 273 100.0
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 1.6e-125 453.0 273 85.7
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 4.8e-125 451.4 273 85.7
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 6.3e-125 451.1 273 85.3
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 6.3e-125 451.1 273 85.3
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 2.4e-124 449.1 273 85.3
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 2.0e-123 446.0 273 83.5
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 7.7e-123 444.1 273 83.2
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 7.7e-123 444.1 273 83.2
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 1.7e-122 443.0 273 86.8
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 2.2e-122 442.6 273 82.8
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 8.5e-122 440.7 275 84.7
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 3.2e-121 438.7 273 88.3
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 3.2e-121 438.7 274 82.8
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 5.5e-121 438.0 274 82.5
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 9.4e-121 437.2 279 83.2
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 1.2e-120 436.8 273 86.8
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 2.1e-120 436.0 274 82.1
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 3.8e-106 388.7 273 73.3
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 1.8e-100 369.8 251 78.1
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 4.8e-93 345.1 276 63.8
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 7.0e-92 341.3 276 64.1
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 6.5e-90 334.7 276 63.8
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 8.5e-90 334.3 276 63.8
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.1e-89 334.0 275 63.6
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.1e-89 334.0 275 63.6
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 3.6e-88 328.9 194 80.9
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 1.0e-87 327.4 276 59.8
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 5.2e-87 325.1 275 61.1
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 8.8e-87 324.3 275 63.3
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 1.5e-86 323.6 280 60.4
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 2.0e-86 323.2 273 60.4
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 2.0e-86 323.2 288 59.7
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 2.6e-86 322.8 270 61.5
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 3.4e-86 322.4 275 60.7
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 9.8e-86 320.9 273 61.9
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 1.3e-85 320.5 272 60.3
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 1.3e-85 320.5 277 59.9
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 1.3e-85 320.5 275 61.5
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 1.7e-85 320.1 279 60.6
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.2e-85 319.7 275 58.9
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 1.4e-84 317.0 282 58.9
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 1.4e-84 317.0 275 59.6
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 1.8e-84 316.6 275 58.2
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 1.8e-84 316.6 273 58.6
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 3.1e-84 315.8 283 58.3
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 3.1e-84 315.8 273 58.2
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 5.4e-84 315.1 283 58.3
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 1.2e-83 313.9 276 58.3
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 1.6e-83 313.5 279 58.4
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 2.0e-83 313.2 274 59.1
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 3.5e-83 312.4 274 58.8
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 3.5e-83 312.4 283 56.5
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 4.5e-83 312.0 279 58.4
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 5.9e-83 311.6 279 58.4
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 1.3e-82 310.5 285 57.2
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 2.3e-82 309.7 274 58.4
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 3.8e-82 308.9 276 57.6
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 1.9e-81 306.6 282 56.0
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 2.5e-81 306.2 269 55.8
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 2.5e-81 306.2 272 57.4
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 3.3e-81 305.8 274 56.6
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 5.5e-81 305.1 274 57.3
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 1.6e-80 303.5 275 55.6
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 4.7e-80 302.0 274 56.9
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 1.0e-79 300.8 274 53.6
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 1.4e-79 300.4 269 58.4
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 5.2e-79 298.5 285 54.4
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 6.8e-79 298.1 278 56.1
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 8.9e-79 297.7 185 76.8
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 1.2e-78 297.4 272 55.1
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 1.2e-78 297.4 274 58.8
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 2.0e-78 296.6 267 55.4
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 2.0e-78 296.6 267 55.8
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.7e-78 295.0 282 55.0
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 7.5e-78 294.7 195 71.8
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 2.2e-77 293.1 284 55.3
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 2.8e-77 292.7 196 71.9
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 3.7e-77 292.4 292 53.1
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 3.7e-77 292.4 278 55.8
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 6.3e-77 291.6 273 52.0
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.4e-76 290.4 194 71.6
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 2.4e-76 289.7 271 52.4
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 1.2e-75 287.3 272 56.2
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 2.7e-75 286.2 265 55.8
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 1.0e-74 284.3 277 53.8
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 2.9e-74 282.7 271 53.9
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 2.9e-74 282.7 271 51.7
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 3.9e-74 282.3 330 48.8
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 5.0e-74 282.0 275 53.1
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 5.0e-74 282.0 275 54.2
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 1.1e-73 280.8 282 52.1
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 2.5e-73 279.6 272 52.9
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 1.6e-72 276.9 292 50.3
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 6.1e-72 275.0 284 50.7
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 6.1e-72 275.0 272 51.8
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 8.0e-72 274.6 193 67.9
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 8.0e-72 274.6 273 49.8
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 1.4e-71 273.9 196 64.8
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 6.8e-71 271.6 196 65.8
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 1.5e-70 270.4 272 52.6
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 1.5e-70 270.4 280 51.8
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 1.5e-70 270.4 198 63.1
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.6e-70 269.6 184 70.1
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 2.9e-69 266.2 303 49.5
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 2.9e-69 266.2 275 50.9
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 1.9e-68 263.5 264 49.2
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 3.2e-68 262.7 284 52.1
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 7.0e-68 261.5 280 48.6
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 1.2e-67 260.8 259 54.4
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 6.0e-67 258.5 279 48.4
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 3.9e-66 255.8 294 49.3
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 6.6e-66 255.0 199 61.3
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 7.3e-65 251.5 213 61.5
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 1.6e-64 250.4 206 63.6
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 1.7e-61 240.4 217 57.1
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 2.2e-61 240.0 190 61.6
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 1.9e-60 236.9 208 58.7
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.0e-58 231.1 194 55.7
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.1e-57 227.6 194 56.2
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.5e-57 227.3 161 67.7
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 5.8e-54 215.3 209 54.5
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 1.4e-52 210.7 111 93.7
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 7.1e-52 208.4 212 52.8
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 9.2e-52 208.0 214 51.9
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 2.1e-51 206.8 115 89.6
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 9.6e-49 198.0 202 55.4
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 3.9e-42 176.0 277 35.7
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 8.7e-42 174.9 112 74.1
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 7.3e-41 171.8 237 38.0
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 8.7e-34 148.3 199 38.7
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 6.2e-32 142.1 192 43.2
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 1.1e-31 141.4 191 45.5
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 5.8e-30 135.6 108 63.9
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 5.8e-30 135.6 107 64.5
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 4.6e-27 125.9 270 29.6
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.3e-26 124.4 84 67.9
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.4e-20 104.4 91 53.8
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.2e-20 103.2 121 44.6
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.2e-20 103.2 130 43.1
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 1.4e-15 87.8 69 59.4
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 4.1e-15 86.3 201 33.3
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 9.0e-15 85.1 197 27.9
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 2.5e-12 77.0 71 46.5
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.7e-09 65.9 44 68.2
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 5.7e-09 65.9 205 30.7
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 1.6e-08 64.3 56 55.4
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 3.7e-08 63.2 48 68.8
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 6.3e-08 62.4 106 38.7
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 2.4e-07 60.5 98 36.7
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 4.1e-07 59.7 106 32.1
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 5.9e-06 55.8 64 54.7


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