Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 2.8e-150 535.4 301 100.0
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.0e-132 476.1 301 89.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.9e-131 472.2 301 88.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 9.3e-130 467.2 302 87.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 6.7e-128 461.1 302 87.1
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 3.3e-127 458.8 301 85.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.4e-125 452.6 326 80.7
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 8.2e-110 401.0 292 80.5
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 4.1e-109 398.7 292 80.1
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 7.9e-105 384.4 301 73.1
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.0e-103 379.8 261 85.1
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.0e-83 314.3 271 66.8
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.2e-83 313.2 258 66.7
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 5.0e-83 312.0 254 68.5
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 5.0e-83 312.0 306 59.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 5.5e-82 308.5 258 66.3
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 9.4e-82 307.8 207 76.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.0e-79 300.1 206 75.2
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 2.0e-79 300.1 268 63.4
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.0e-79 300.1 244 67.6
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 4.4e-79 298.9 238 66.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 5.7e-79 298.5 210 74.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 7.5e-79 298.1 262 63.0
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 9.8e-79 297.7 205 73.2
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.7e-78 297.0 267 63.3
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.7e-78 297.0 205 74.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.2e-78 296.6 208 77.4
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.7e-78 295.8 208 75.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.7e-78 295.8 258 65.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 8.3e-78 294.7 205 72.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.1e-77 294.3 269 62.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.4e-77 293.9 240 66.7
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.4e-77 293.1 259 62.2
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 5.4e-77 292.0 244 64.3
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 9.1e-77 291.2 312 59.0
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 9.1e-77 291.2 258 62.0
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.2e-76 290.8 257 61.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.2e-76 290.8 266 62.4
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.0e-76 290.0 262 61.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 2.7e-76 289.7 208 79.3
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.7e-76 289.7 244 63.5
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.7e-76 289.7 305 55.1
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 3.5e-76 289.3 205 71.7
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.5e-76 289.3 268 61.9
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 4.5e-76 288.9 306 54.9
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.5e-76 288.9 208 76.0
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.0e-75 287.7 239 64.4
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.0e-75 287.7 303 55.1
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.0e-75 287.7 254 63.4
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.3e-75 287.3 243 65.0
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 2.9e-75 286.2 193 75.6
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.6e-75 285.0 266 59.0
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 6.6e-75 285.0 242 63.6
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 8.6e-75 284.6 258 62.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.5e-74 283.9 258 62.0
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.9e-74 283.5 277 59.6
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.9e-74 283.5 244 62.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.9e-74 283.5 266 59.4
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.9e-74 283.5 304 55.3
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.5e-74 282.0 258 62.4
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.5e-74 281.2 242 62.4
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.8e-73 279.6 246 61.4
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.0e-72 277.7 212 69.3
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 5.2e-72 275.4 242 60.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.2e-70 270.0 260 59.6
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 3.7e-70 269.2 279 55.6
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 6.3e-70 268.5 239 61.9
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 6.3e-70 268.5 302 54.0
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 6.3e-70 268.5 225 63.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 5.4e-69 265.4 258 57.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.2e-69 264.6 248 60.1
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 9.2e-69 264.6 302 54.0
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 3.8e-67 259.2 248 60.1
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 5.6e-66 255.4 175 73.7
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.0e-64 249.6 171 76.0
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.0e-64 249.2 171 76.0
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.5e-63 247.3 287 54.7
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 9.8e-63 244.6 252 51.6
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.3e-62 244.2 304 49.7
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-62 243.8 288 52.1
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.7e-62 243.8 287 54.0
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 2.2e-62 243.4 209 57.9
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.2e-62 243.4 230 62.2
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 2.9e-62 243.0 255 51.8
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 4.9e-62 242.3 238 60.1
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 6.4e-62 241.9 255 51.8
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.4e-61 240.0 189 65.6
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 4.6e-60 235.7 258 55.0
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 4.6e-60 235.7 206 57.8
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.9e-58 230.3 203 61.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.9e-58 230.3 255 55.3
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 4.3e-58 229.2 283 50.9
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.1e-56 224.6 171 69.0
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.0e-56 222.6 241 53.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.9e-53 213.8 293 48.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 5.1e-51 205.7 136 76.5
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 8.6e-51 204.9 266 50.0
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.5e-50 203.4 185 62.2
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 7.3e-50 201.8 201 57.7
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 4.4e-47 192.6 136 71.3
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.9e-46 189.9 116 89.7
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.1e-45 188.0 252 43.3
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.2e-44 184.5 214 51.4
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.3e-43 181.0 212 51.9
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.6e-41 174.1 268 46.6
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 8.9e-40 168.3 210 50.0
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 5.8e-39 165.6 228 44.3
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.8e-38 162.9 143 54.5
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 3.0e-35 153.3 134 67.9
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 4.3e-34 149.4 132 62.1
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 7.3e-34 148.7 226 43.8
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 7.3e-34 148.7 150 58.0
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.7e-33 146.0 256 42.6
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.7e-22 110.9 178 34.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.2e-22 110.5 187 37.4
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 6.4e-22 109.0 97 59.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 4.8e-17 92.8 192 33.3
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.7e-14 84.3 72 61.1
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.2e-12 78.2 83 54.2
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 4.6e-12 76.3 69 60.9
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 9.6e-10 68.6 55 60.0
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 4.9e-06 56.2 34 79.4


User provided reference genes

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