Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 2.1e-135 485.7 250 100.0
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 3.4e-125 451.8 250 92.4
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 1.2e-119 433.3 251 90.4
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 4.0e-118 428.3 251 89.6
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 1.5e-117 426.4 251 88.0
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 7.5e-117 424.1 252 88.5
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 5.8e-109 397.9 257 80.2
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 5.8e-109 397.9 245 83.3
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 9.8e-109 397.1 245 83.7
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 5.6e-104 381.3 236 85.2
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 5.6e-104 381.3 236 85.2
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 8.9e-102 374.0 240 83.3
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 1.7e-100 369.8 227 85.9
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 7.3e-96 354.4 228 78.5
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 3.6e-87 325.5 250 65.6
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 5.8e-85 318.2 250 64.4
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 5.4e-83 311.6 250 62.4
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 5.4e-83 311.6 223 68.2
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 9.3e-83 310.8 241 64.3
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 1.2e-82 310.5 250 61.6
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 3.5e-82 308.9 250 61.2
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 3.5e-82 308.9 241 63.9
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 6.0e-82 308.1 249 62.2
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 6.0e-82 308.1 232 63.8
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 3.0e-81 305.8 254 62.2
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 6.6e-81 304.7 249 61.4
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 8.7e-81 304.3 247 62.3
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 3.3e-80 302.4 237 62.0
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 4.3e-80 302.0 224 64.3
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 4.3e-80 302.0 249 61.0
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 5.6e-80 301.6 247 61.1
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 5.6e-80 301.6 251 61.0
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 5.6e-80 301.6 221 67.0
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 9.6e-80 300.8 248 62.5
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.3e-79 300.4 248 62.5
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 1.6e-79 300.1 247 62.3
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.1e-79 299.7 250 59.6
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 2.1e-79 299.7 250 59.6
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 2.1e-79 299.7 221 64.7
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 2.8e-79 299.3 221 66.1
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 6.2e-79 298.1 224 62.9
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 8.1e-79 297.7 224 67.0
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 1.1e-78 297.4 239 62.8
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 1.4e-78 297.0 241 61.8
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 1.8e-78 296.6 248 59.3
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 4.0e-78 295.4 240 61.2
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 5.3e-78 295.0 225 65.8
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 6.9e-78 294.7 227 64.8
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 9.0e-78 294.3 240 60.8
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 1.2e-77 293.9 226 62.4
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 1.5e-77 293.5 240 59.6
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 2.6e-77 292.7 231 60.2
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 3.4e-77 292.4 242 60.3
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 3.4e-77 292.4 226 61.9
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 4.5e-77 292.0 242 60.3
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 4.5e-77 292.0 242 60.3
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 4.5e-77 292.0 238 59.2
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 5.8e-77 291.6 240 60.8
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 1.3e-76 290.4 224 62.9
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 1.3e-76 290.4 225 62.7
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 3.8e-76 288.9 245 60.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 6.4e-76 288.1 224 62.1
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.1e-75 287.3 250 58.4
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 1.9e-75 286.6 239 60.7
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.9e-75 286.6 225 64.4
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 5.4e-75 285.0 227 62.1
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 9.3e-75 284.3 238 59.7
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.6e-74 283.5 235 63.0
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.6e-74 283.5 224 62.9
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 3.9e-73 278.9 221 62.0
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 8.7e-73 277.7 226 60.6
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 1.6e-71 273.5 235 59.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 3.6e-71 272.3 228 61.0
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 6.2e-71 271.6 250 58.8
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 6.2e-71 271.6 235 56.2
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 8.1e-71 271.2 291 51.2
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.4e-70 270.4 243 54.3
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 2.4e-70 269.6 227 59.0
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 3.1e-70 269.2 249 54.2
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 9.0e-70 267.7 227 58.6
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 2.6e-69 266.2 243 54.7
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 4.5e-69 265.4 235 59.1
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 2.2e-68 263.1 221 59.7
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 6.4e-68 261.5 220 60.5
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 9.3e-67 257.7 218 58.7
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 1.2e-66 257.3 240 55.8
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 2.1e-66 256.5 248 53.6
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.0e-65 254.2 264 53.0
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 8.7e-65 251.1 246 54.1
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 1.9e-64 250.0 222 58.1
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 5.3e-62 241.9 224 55.8
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 2.0e-61 240.0 186 59.7
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 1.0e-60 237.7 214 58.4
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 2.9e-60 236.1 193 60.6
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 2.5e-59 233.0 190 58.9
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 3.0e-57 226.1 288 48.6
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 4.3e-56 222.2 198 56.6
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 4.3e-56 222.2 238 51.7
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 6.3e-55 218.4 230 54.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.1e-54 217.6 231 54.1
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 1.2e-53 214.2 260 48.1
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 2.2e-52 209.9 182 56.0
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.7e-50 203.0 173 58.4
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 8.7e-49 198.0 159 62.9
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 3.3e-48 196.1 162 59.9
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 4.3e-48 195.7 132 81.8
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 1.0e-44 184.5 242 46.3
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 6.5e-44 181.8 223 45.7
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 2.5e-43 179.9 148 59.5
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 3.6e-42 176.0 166 59.6
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 2.8e-39 166.4 176 51.7
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 1.5e-37 160.6 123 64.2
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 7.7e-37 158.3 124 63.7
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 3.8e-36 156.0 121 61.2
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 7.9e-34 148.3 218 37.2
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 2.0e-32 143.7 146 52.7
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 2.6e-29 133.3 221 33.5
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 3.2e-19 99.8 112 46.4
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 5.5e-19 99.0 80 60.0
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 9.1e-14 81.6 65 55.4
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 1.5e-08 64.3 86 44.2
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 1.3e-07 61.2 43 65.1


User provided reference genes

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