Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 3.3e-74 281.6 138 100.0
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 4.1e-72 274.6 138 96.4
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.5e-71 272.7 138 95.7
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 5.0e-70 267.7 138 93.5
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 6.5e-70 267.3 138 93.5
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 8.5e-70 266.9 138 94.2
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 3.2e-69 265.0 138 92.8
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 3.2e-69 265.0 138 93.5
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 3.2e-69 265.0 138 93.5
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 3.2e-69 265.0 138 93.5
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 3.2e-69 265.0 138 93.5
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 3.2e-69 265.0 138 93.5
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 1.1e-66 256.5 139 92.1
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 5.7e-66 254.2 139 89.2
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 7.4e-66 253.8 139 89.9
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 7.4e-66 253.8 138 89.1
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 9.7e-66 253.4 137 91.2
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 9.7e-66 253.4 138 89.9
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 3.7e-65 251.5 138 87.0
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 5.0e-62 241.1 136 86.0
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 3.6e-60 235.0 136 84.6
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 4.7e-60 234.6 134 82.8
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 2.0e-58 229.2 136 80.9
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 2.8e-57 225.3 134 79.1
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 6.3e-57 224.2 131 79.4
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.8e-56 222.6 134 80.6
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.8e-56 222.6 136 78.7
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.4e-56 222.2 137 75.9
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.4e-56 222.2 137 75.9
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 7.0e-56 220.7 136 79.4
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.2e-55 219.9 136 78.7
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.2e-55 219.9 136 78.7
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 1.2e-55 219.9 137 74.5
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 1.5e-55 219.5 136 78.7
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.0e-55 219.2 137 78.1
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.6e-55 218.8 136 77.9
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 3.5e-55 218.4 136 75.0
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 3.5e-55 218.4 136 78.7
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 4.5e-55 218.0 136 77.9
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 5.9e-55 217.6 137 75.9
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 7.7e-55 217.2 135 77.8
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 7.7e-55 217.2 136 77.2
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.0e-54 216.9 138 76.8
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 77.4
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 76.6
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 76.6
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.3e-54 216.5 127 79.5
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 1.7e-54 216.1 136 77.2
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.2e-54 215.7 136 74.3
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.2e-54 215.7 136 76.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 2.9e-54 215.3 136 75.0
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 3.8e-54 214.9 137 75.9
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 3.8e-54 214.9 136 74.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 5.0e-54 214.5 136 77.9
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 6.5e-54 214.2 136 75.7
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 8.5e-54 213.8 131 75.6
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 8.5e-54 213.8 136 77.2
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 1.1e-53 213.4 137 75.9
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 1.1e-53 213.4 138 75.4
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 1.5e-53 213.0 136 75.0
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 1.9e-53 212.6 136 75.7
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 2.5e-53 212.2 137 75.9
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 2.5e-53 212.2 137 73.7
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 3.2e-53 211.8 135 76.3
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 3.2e-53 211.8 137 74.5
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.2e-53 211.5 138 74.6
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 4.2e-53 211.5 136 73.5
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 5.5e-53 211.1 136 71.3
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 5.5e-53 211.1 136 74.3
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 5.5e-53 211.1 137 74.5
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 7.2e-53 210.7 137 75.2
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 9.4e-53 210.3 134 73.1
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 9.4e-53 210.3 137 75.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 9.4e-53 210.3 138 73.9
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 1.2e-52 209.9 132 75.8
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.2e-52 209.9 137 74.5
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 2.1e-52 209.1 136 73.5
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 2.7e-52 208.8 137 73.7
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.6e-52 208.4 131 74.8
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 4.7e-52 208.0 138 71.7
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 4.7e-52 208.0 136 74.3
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 4.7e-52 208.0 136 74.3
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 6.1e-52 207.6 132 74.2
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 8.0e-52 207.2 136 72.8
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 8.0e-52 207.2 136 72.1
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 3.0e-51 205.3 136 73.5
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.1e-50 203.4 134 72.4
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 1.1e-50 203.4 137 71.5
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 4.4e-50 201.4 136 71.3
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 4.4e-50 201.4 129 76.0
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.7e-49 199.5 130 73.1
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 4.1e-48 194.9 137 73.7
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 4.2e-45 184.9 131 69.5
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.6e-44 183.0 130 67.7
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 2.3e-43 179.1 138 63.0
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 8.3e-41 170.6 128 64.8
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.8e-40 169.5 116 71.6
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.0e-39 166.0 152 58.6
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.5e-37 159.8 93 79.6
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 1.9e-37 159.5 129 56.6
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.6e-36 156.4 132 62.9
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 2.1e-36 156.0 158 55.7
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 3.6e-36 155.2 95 75.8
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 3.0e-35 152.1 101 69.3
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.0e-34 149.4 136 61.0
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 4.4e-34 148.3 95 70.5
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 4.9e-33 144.8 101 67.3
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.5e-31 138.7 97 68.0
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 4.5e-31 138.3 99 64.6
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 7.7e-31 137.5 134 53.7
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-28 129.4 136 52.9
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.7e-28 128.3 136 55.1
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.1e-21 107.1 131 45.8
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 4.3e-21 105.1 90 58.9
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.6e-20 103.2 95 52.6
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 6.1e-20 101.3 136 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 2.0e-18 96.3 123 41.5
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 2.2e-17 92.8 54 75.9
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 4.9e-17 91.7 126 40.5
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.1e-16 90.5 60 68.3
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.1e-16 90.5 54 74.1
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 1.2e-15 87.0 136 41.9
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 2.3e-14 82.8 49 77.6
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 1.2e-12 77.0 40 90.0
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 1.7e-09 66.6 41 75.6
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 3.7e-09 65.5 38 76.3
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.7e-06 56.6 30 83.3
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 8.6e-06 54.3 147 29.9


User provided reference genes

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