Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 1.2e-290 1002.3 464 100.0
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 5.2e-289 996.9 464 99.4
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 4.4e-288 993.8 464 99.1
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.3e-268 929.1 497 88.1
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.5e-267 925.6 454 93.6
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 4.9e-255 884.0 496 85.1
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 3.5e-253 877.9 455 87.5
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.9e-252 874.4 455 86.4
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 3.9e-252 874.4 458 87.3
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.6e-250 869.0 471 84.7
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.6e-250 867.8 454 86.6
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 4.5e-248 860.9 451 85.1
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.5e-248 860.9 450 86.0
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 4.9e-247 857.4 463 84.7
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.1e-246 856.3 447 86.1
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.1e-246 856.3 449 86.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.6e-245 852.4 450 85.1
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.7e-245 851.7 436 88.3
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 3.0e-244 848.2 453 85.7
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 5.1e-244 847.4 449 85.1
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.5e-243 845.1 449 85.1
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 5.6e-243 844.0 435 87.6
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 7.4e-243 843.6 449 84.6
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.3e-242 842.8 447 84.1
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 4.8e-242 840.9 451 84.5
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 6.2e-242 840.5 435 87.1
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.1e-241 839.7 440 85.2
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.8e-241 839.0 435 86.9
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 6.9e-241 837.0 454 83.0
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 6.9e-241 837.0 493 78.3
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 6.9e-241 837.0 493 78.3
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 6.9e-241 837.0 455 82.4
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 9.0e-241 836.6 456 82.9
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 5.8e-240 833.9 470 81.3
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 1.0e-239 833.2 443 84.4
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.0e-239 833.2 455 81.3
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.3e-239 832.8 438 85.6
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.3e-239 832.8 436 86.0
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.2e-239 832.0 442 84.8
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.2e-239 832.0 447 81.9
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 8.4e-239 830.1 437 84.9
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 8.4e-239 830.1 447 83.7
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.1e-238 829.7 437 84.7
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.9e-238 828.9 431 86.8
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.5e-238 828.6 448 81.9
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 2.5e-238 828.6 445 84.3
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 3.2e-238 828.2 449 83.3
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.6e-237 825.9 450 82.9
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.7e-237 825.1 456 81.6
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 3.0e-236 821.6 445 83.4
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.0e-236 821.6 455 81.8
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.9e-235 818.9 440 84.1
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.5e-235 818.5 442 82.8
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 3.3e-235 818.1 448 81.2
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 4.3e-235 817.8 447 81.9
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 7.4e-235 817.0 448 81.9
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.8e-234 815.1 441 82.3
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 3.7e-234 814.7 443 81.5
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 3.7e-234 814.7 443 81.5
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 4.8e-234 814.3 452 81.9
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 8.2e-234 813.5 457 81.2
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.1e-233 813.1 439 82.9
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.4e-233 812.8 448 80.8
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 1.4e-233 812.8 448 80.8
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 3.1e-233 811.6 448 80.6
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.1e-233 811.6 442 82.1
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.5e-232 809.3 477 76.7
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 4.5e-232 807.7 464 79.5
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 5.8e-232 807.4 448 80.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.3e-231 806.2 448 80.4
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 5.0e-231 804.3 444 82.4
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.5e-230 802.0 433 82.9
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 9.3e-230 800.0 432 82.6
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.0e-228 796.6 445 81.6
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.8e-228 795.8 432 82.4
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 2.5e-227 792.0 432 82.6
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 5.7e-227 790.8 437 80.5
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.3e-226 789.6 432 82.6
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.3e-226 789.6 432 82.6
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.3e-226 789.6 443 80.1
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.2e-226 788.9 455 79.6
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.8e-226 788.5 432 81.2
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.1e-225 786.6 432 82.4
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 5.9e-224 780.8 484 75.4
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.0e-223 780.0 440 79.8
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.7e-223 779.2 448 77.2
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 6.1e-221 770.8 454 77.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 2.2e-215 752.3 451 76.3
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 9.4e-214 746.9 435 77.9
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 3.6e-213 745.0 433 77.8
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 8.2e-210 733.8 448 75.0
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.1e-209 733.4 382 86.1
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 5.3e-209 731.1 380 86.6
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.5e-208 729.6 426 81.5
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 7.7e-200 700.7 397 79.3
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 4.2e-198 694.9 434 72.4
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 2.2e-194 682.6 421 72.0
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.4e-193 679.1 448 70.5
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 7.0e-193 677.6 447 71.4
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.0e-192 676.0 444 70.3
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 3.9e-175 618.6 433 65.6
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 2.6e-171 605.9 336 79.5
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 7.5e-171 604.4 308 87.7
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 5.6e-166 588.2 308 84.7
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.2e-165 587.0 440 63.9
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.3e-156 556.2 455 59.6
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 6.8e-156 554.7 295 83.4
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 3.4e-155 552.4 376 69.9
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.3e-130 470.7 276 76.4
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.5e-81 307.8 189 76.2
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 3.7e-77 293.1 169 78.1
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.7e-74 284.3 422 44.1
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.1e-73 281.6 175 73.7
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.2e-69 267.3 132 87.9
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 4.1e-68 263.1 143 83.2
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.0e-68 262.3 120 96.7
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.2e-67 261.5 231 57.6
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 4.3e-65 253.1 216 62.0
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.8e-63 247.7 133 82.7
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 3.0e-63 246.9 135 81.5
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.2e-53 214.2 124 77.4
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.0e-47 193.4 119 74.8
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 3.4e-46 190.3 249 47.4
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.3e-33 146.7 84 77.4
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.9e-25 121.3 105 53.3
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 7.3e-25 119.4 68 75.0
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.4e-23 115.2 181 38.7
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 2.0e-22 111.3 62 79.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.4e-22 110.5 105 53.3
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 9.9e-22 109.0 61 78.7
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 1.4e-15 88.6 68 61.8
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.8e-10 71.6 63 55.6
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 2.8e-08 64.3 43 65.1


User provided reference genes

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