Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g026860 Solanum pennellii HOM05D007832 ORTHO05D009598 3.1e-84 315.1 159 100.0
PGSC0003DMG400044576 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.2e-52 208.8 162 67.3
PGSC0003DMG400005968 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.9e-45 184.9 164 60.4
PGSC0003DMG400035463 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.9e-33 146.4 172 50.0
CAN.G1184.14 Capsicum annuum HOM05D007832 ORTHO05D009598 2.2e-21 106.3 144 42.4
CAN.G843.2 Capsicum annuum HOM05D007832 ORTHO05D009598 2.2e-21 106.3 162 39.5
Nitab4.5_0000234g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.9e-21 105.9 137 43.8
CAN.G843.3 Capsicum annuum HOM05D007832 ORTHO05D009598 6.4e-21 104.8 162 38.9
PGSC0003DMG400039981 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.4e-20 102.8 161 37.9
CAN.G843.1 Capsicum annuum HOM05D007832 ORTHO05D009598 5.4e-20 101.7 162 37.0
PGSC0003DMG400005533 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.3e-20 100.9 143 38.5
Nitab4.5_0007309g0020 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.1e-19 99.8 153 38.6
PGSC0003DMG400005534 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.0e-19 98.2 161 36.0
CAN.G1392.11 Capsicum annuum HOM05D007832 ORTHO05D009598 1.0e-18 97.4 144 39.6
Sopen12g007960 Solanum pennellii HOM05D007832 ORTHO05D009598 1.7e-18 96.7 144 41.0
Solyc12g016170.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 8.7e-18 94.4 144 41.0
Sopen12g007920 Solanum pennellii HOM05D007832 ORTHO05D009598 5.6e-17 91.7 135 41.5
PGSC0003DMG400034608 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.6e-17 91.7 144 40.3
Sopen12g007870 Solanum pennellii HOM05D007832 ORTHO05D009598 7.3e-17 91.3 143 39.2
Peaxi162Scf00006g00057 Petunia axillaris HOM05D007832 ORTHO05D009598 1.3e-16 90.5 147 36.1
Peaxi162Scf00006g00075 Petunia axillaris HOM05D007832 ORTHO05D009598 1.3e-16 90.5 147 36.1
PGSC0003DMG400035476 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.3e-16 90.5 144 39.6
Sopen12g025810 Solanum pennellii HOM05D007832 ORTHO05D009598 1.6e-16 90.1 135 40.7
Solyc12g016180.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 4.8e-16 88.6 144 39.6
PGSC0003DMG400044231 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.1e-16 87.8 144 39.6
Sopen12g007950 Solanum pennellii HOM05D007832 ORTHO05D009598 1.1e-15 87.4 150 38.0
PGSC0003DMG400045649 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.4e-15 87.0 144 38.9
Peaxi162Scf00440g00014 Petunia axillaris HOM05D007832 ORTHO05D009598 5.3e-15 85.1 160 35.0
PGSC0003DMG400044285 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.9e-15 84.7 144 36.1
Peaxi162Scf00611g00515 Petunia axillaris HOM05D007832 ORTHO05D009598 9.0e-15 84.3 138 39.1
Nitab4.5_0008777g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.2e-14 84.0 139 36.0
Peaxi162Scf00307g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 7.6e-14 81.3 135 37.8
Peaxi162Scf00894g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 7.6e-14 81.3 135 37.8
Peaxi162Scf03110g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 7.6e-14 81.3 135 37.8
Peaxi162Scf00593g00002 Petunia axillaris HOM05D014229 ORTHO05D009598 9.9e-14 80.9 135 36.3
Nitab4.5_0000153g0130 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.3e-13 80.5 139 34.5
PGSC0003DMG400046736 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.4e-12 76.3 136 37.5
PGSC0003DMG400037342 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.0e-10 70.9 136 32.4
Peaxi162Scf00538g00047 Petunia axillaris HOM05D007832 ORTHO05D009598 5.1e-10 68.6 129 33.3
Peaxi162Scf29147g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 8.7e-10 67.8 107 38.3
Peaxi162Scf00617g00003 Petunia axillaris HOM05D007832 ORTHO05D009598 2.5e-09 66.2 138 34.8
CAN.G201.31 Capsicum annuum HOM05D007832 ORTHO05D009598 1.3e-08 63.9 121 35.5
Sopen12g025820 Solanum pennellii HOM05D000004 ORTHO05D009598 1.3e-08 63.9 111 36.9
Nitab4.5_0007309g0050 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.1e-08 63.2 94 36.2
PGSC0003DMG400047062 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.8e-08 62.8 144 31.9
Solyc12g017300.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 6.2e-08 61.6 112 35.7
Solyc12g016150.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 1.1e-07 60.8 114 36.8
CAN.G843.4 Capsicum annuum HOM05D007832 ORTHO05D009598 1.8e-07 60.1 78 44.9
Peaxi162Scf00617g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.8e-07 60.1 137 32.1
Peaxi162Scf00617g00012 Petunia axillaris HOM05D007832 ORTHO05D009598 2.4e-07 59.7 131 31.3
Atru.chr1.1376 Acer truncatum HOM05D000307 ORTHO05D000166 3.1e-07 59.3 139 25.9
Peaxi162Scf00617g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 3.1e-07 59.3 137 29.9
Sp3g10030 Schrenkiella parvula HOM05D000307 ORTHO05D000166 5.3e-07 58.5 131 29.0
Nitab4.5_0000163g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 9.0e-07 57.8 144 31.2
Peaxi162Scf00593g00034 Petunia axillaris HOM05D007832 ORTHO05D009598 9.0e-07 57.8 119 31.1
PGSC0003DMG400041411 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.2e-06 57.4 148 31.8
CAN.G1392.12 Capsicum annuum HOM05D007832 ORTHO05D009598 1.5e-06 57.0 66 47.0
Thhalv10021945m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 1.5e-06 57.0 131 25.2
Nitab4.5_0004114g0070 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.0e-06 56.6 147 30.6
Peaxi162Scf01193g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 2.0e-06 56.6 128 34.4
SGA_v2.0_scaffold153G36988 Striga asiatica HOM05D000307 ORTHO05D009598 4.5e-06 55.5 130 28.5
Nitab4.5_0002260g0260 Nicotiana tabacum HOM05D007832 ORTHO05D009598 5.8e-06 55.1 131 29.8
CAN.G26643.1 Capsicum annuum HOM05D007832 ORTHO05D009598 9.9e-06 54.3 78 41.0


User provided reference genes

Program Settings