Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020610 Solanum pennellii HOM05D003617 ORTHO05D007165 4.4e-167 591.3 308 100.0
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 5.6e-106 388.3 422 57.1
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-83 313.5 387 52.7
PGSC0003DMG400046895 Solanum tuberosum HOM05D000995 ORTHO05D007165 1.3e-73 280.8 209 76.6
Sopen12g019440 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-73 280.4 244 66.8
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 5.0e-70 268.9 340 54.4
PGSC0003DMG400039593 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.6e-60 237.3 229 65.5
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 2.2e-54 216.9 356 45.5
PGSC0003DMG400037839 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.6e-50 203.4 155 76.8
PGSC0003DMG400007445 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-46 190.3 155 74.8
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-40 170.6 307 41.0
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.5e-29 131.7 234 38.5
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.0e-23 114.0 133 51.9
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 1.0e-22 111.7 265 33.6
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-21 107.5 245 35.5
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.3e-21 105.5 295 31.5
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-20 103.2 212 36.8
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 4.0e-19 99.8 243 35.4
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-18 98.2 405 28.1
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-18 97.8 69 72.5
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.8e-18 95.9 258 33.7
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.9e-17 92.8 84 61.9
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.4e-16 91.3 116 49.1
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.2e-16 88.6 79 59.5
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 1.6e-15 87.8 69 68.1
Nitab4.5_0003674g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-15 87.4 144 40.3
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-15 87.0 201 36.3
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-15 86.7 201 36.8
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.6e-15 86.3 116 46.6
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-13 81.6 249 30.5
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 2.5e-13 80.5 283 31.8
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.3e-13 80.1 69 60.9
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 5.6e-13 79.3 66 65.2
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 7.3e-13 79.0 53 79.2
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-12 78.2 245 32.2
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-12 77.8 249 30.5
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-12 76.6 290 29.3
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-11 74.3 282 30.5
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.0e-11 73.2 268 28.0
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.4e-10 70.1 83 47.0
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-10 69.7 253 28.9
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.8e-10 69.3 249 28.9
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-09 68.2 253 30.8
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-09 67.8 288 27.8
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-09 66.6 179 29.1
Sopen09g010940 Solanum pennellii HOM05D003617 ORTHO05D007165 4.9e-09 66.2 41 78.0
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-08 65.1 296 26.4
Nitab4.5_0000623g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-08 64.7 201 32.8
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-08 64.7 198 31.8
Nitab4.5_0004939g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-08 64.3 134 35.1
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-07 61.2 69 46.4
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-07 60.5 69 44.9
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-07 60.1 231 30.3
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 4.6e-07 59.7 127 37.8
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.8e-07 58.9 54 55.6
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-06 57.4 69 43.5
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-06 56.6 267 27.7
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-06 56.6 69 43.5
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-06 56.2 61 47.5
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.6e-06 55.8 69 42.0


User provided reference genes

Program Settings