Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 9.3e-84 313.5 162 100.0
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.3e-77 293.1 163 96.3
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.7e-77 292.7 162 96.9
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 3.1e-63 245.4 167 83.8
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.1e-55 220.3 166 77.1
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.0e-50 202.2 165 72.7
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.0e-42 175.6 159 68.6
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 3.7e-40 168.7 124 73.4
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.8e-39 166.4 109 74.3
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.8e-39 166.4 99 81.8
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.4e-38 162.2 109 72.5
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 4.5e-38 161.8 133 65.4
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 4.5e-38 161.8 105 74.3
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 5.9e-38 161.4 117 71.8
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.3e-37 160.2 120 69.2
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.2e-37 159.5 106 75.5
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.9e-37 159.1 142 64.1
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 2.9e-37 159.1 139 61.9
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 2.9e-37 159.1 116 69.8
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 5.0e-37 158.3 97 78.4
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 6.5e-37 157.9 158 57.6
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 6.5e-37 157.9 114 67.5
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 1.1e-36 157.1 97 77.3
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.1e-36 157.1 99 76.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.1e-36 157.1 99 76.8
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.9e-36 156.4 137 62.0
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 2.5e-36 156.0 99 75.8
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 3.2e-36 155.6 112 70.5
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 7.2e-36 154.5 117 68.4
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 7.2e-36 154.5 117 68.4
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 7.2e-36 154.5 154 57.1
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 7.2e-36 154.5 133 60.9
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.2e-35 153.7 96 77.1
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 1.6e-35 153.3 166 53.0
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.1e-35 152.9 117 69.2
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.1e-35 152.9 154 57.1
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.1e-35 152.9 154 57.1
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.1e-35 152.9 95 77.9
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 2.1e-35 152.9 93 77.4
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 2.7e-35 152.5 93 77.4
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 2.7e-35 152.5 133 59.4
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 2.7e-35 152.5 143 56.6
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 2.7e-35 152.5 119 65.5
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 2.7e-35 152.5 99 74.7
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 2.7e-35 152.5 111 73.0
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 2.7e-35 152.5 98 74.5
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 3.6e-35 152.1 111 69.4
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.7e-35 151.8 96 76.0
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 4.7e-35 151.8 95 75.8
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 4.7e-35 151.8 162 53.7
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 6.1e-35 151.4 148 55.4
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 6.1e-35 151.4 119 67.2
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 6.1e-35 151.4 93 76.3
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 6.1e-35 151.4 93 76.3
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 6.1e-35 151.4 157 52.9
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 7.9e-35 151.0 148 57.4
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 7.9e-35 151.0 96 75.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 7.9e-35 151.0 118 66.9
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 7.9e-35 151.0 123 65.9
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.0e-34 150.6 141 58.2
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.8e-34 149.8 127 63.0
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.3e-34 149.4 125 63.2
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 2.3e-34 149.4 95 75.8
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 2.3e-34 149.4 129 62.8
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 3.0e-34 149.1 156 54.5
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 3.9e-34 148.7 93 74.2
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.9e-34 148.7 136 58.8
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.1e-34 148.3 167 51.5
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 6.7e-34 147.9 126 64.3
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.7e-34 147.9 162 54.3
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.7e-34 147.9 162 54.3
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 8.8e-34 147.5 120 62.5
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.8e-34 147.5 93 75.3
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.1e-33 147.1 119 63.0
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.5e-33 146.7 167 50.3
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.5e-33 146.7 167 50.3
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 2.0e-33 146.4 118 65.3
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.0e-33 146.4 103 70.9
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.0e-33 146.4 103 70.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 2.6e-33 146.0 119 62.2
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.4e-33 145.2 164 50.0
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 4.4e-33 145.2 102 69.6
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.7e-32 143.3 101 70.3
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.3e-32 141.4 98 69.4
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 4.5e-30 135.2 93 67.7
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 5.9e-30 134.8 143 55.9
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.5e-28 130.2 98 65.3
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.9e-28 129.8 80 77.5
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 2.5e-28 129.4 152 50.0
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.0e-26 124.0 71 80.3
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.1e-23 114.0 64 82.8
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 7.0e-23 111.3 131 51.1
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 7.0e-23 111.3 101 55.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 3.5e-22 109.0 92 60.9
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 1.0e-21 107.5 75 69.3
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.3e-21 107.1 75 69.3
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 5.0e-21 105.1 63 76.2
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 6.5e-21 104.8 62 75.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 3.6e-19 99.0 62 72.6


User provided reference genes

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