Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 3.2e-153 545.0 271 100.0
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 2.9e-122 442.2 268 83.6
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 4.2e-105 385.2 260 76.5
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 5.2e-71 271.9 263 57.8
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.2e-46 191.0 274 45.3
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 5.6e-41 172.2 256 43.0
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 4.7e-40 169.1 257 44.4
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 1.1e-39 167.9 261 40.6
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 3.4e-38 162.9 263 41.4
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 7.5e-38 161.8 262 42.4
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 2.2e-37 160.2 266 38.3
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 4.9e-37 159.1 240 44.2
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 1.4e-36 157.5 261 43.7
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 1.9e-36 157.1 272 38.6
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 2.4e-36 156.8 270 39.6
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 3.2e-36 156.4 269 42.0
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.2e-35 154.5 300 36.0
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 1.2e-35 154.5 204 51.0
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 2.7e-35 153.3 260 40.4
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 3.5e-35 152.9 248 43.5
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 4.6e-35 152.5 200 50.0
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 4.6e-35 152.5 204 50.0
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 7.8e-35 151.8 224 47.8
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 1.0e-34 151.4 282 37.9
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 3.0e-34 149.8 268 41.4
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 3.9e-34 149.4 268 36.9
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 8.6e-34 148.3 271 36.9
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 1.1e-33 147.9 274 35.8
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.5e-33 146.7 257 40.9
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 3.6e-32 142.9 277 38.6
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 4.7e-32 142.5 265 36.2
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 1.1e-31 141.4 301 34.6
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 1.4e-31 141.0 217 45.2
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 2.3e-31 140.2 286 36.7
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 3.1e-31 139.8 279 35.8
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 4.0e-31 139.4 296 35.5
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 5.2e-31 139.0 287 34.5
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 6.8e-31 138.7 289 37.0
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 1.5e-30 137.5 301 34.2
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 2.0e-30 137.1 205 41.0
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 3.4e-30 136.3 227 40.1
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 4.4e-30 136.0 268 35.8
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 5.8e-30 135.6 104 67.3
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 9.9e-30 134.8 249 35.7
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 1.3e-29 134.4 283 35.3
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 1.3e-29 134.4 273 37.4
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 2.9e-29 133.3 267 34.8
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 4.9e-29 132.5 282 35.1
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 8.3e-29 131.7 295 34.9
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 1.1e-28 131.3 273 36.3
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 1.9e-28 130.6 246 37.0
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 1.9e-28 130.6 293 33.4
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 2.4e-28 130.2 222 37.8
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 3.2e-28 129.8 248 35.9
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 3.2e-28 129.8 248 35.9
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 5.4e-28 129.0 187 41.7
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 9.2e-28 128.3 276 34.4
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 1.2e-27 127.9 257 37.0
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 2.1e-27 127.1 186 40.9
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 2.1e-27 127.1 179 41.9
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.7e-27 126.7 273 35.5
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 2.7e-27 126.7 287 36.6
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 4.6e-27 125.9 262 37.0
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 6.0e-27 125.6 252 36.1
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 7.8e-27 125.2 209 40.2
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 1.0e-26 124.8 228 39.5
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 2.3e-26 123.6 200 42.5
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.3e-26 123.6 191 41.4
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 3.0e-26 123.2 203 38.4
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 3.9e-26 122.9 181 42.5
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 6.6e-26 122.1 318 33.0
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 6.6e-26 122.1 264 33.7
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 1.5e-25 120.9 281 34.2
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 3.3e-25 119.8 379 29.3
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 4.3e-25 119.4 251 36.3
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 5.6e-25 119.0 249 34.5
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 5.6e-25 119.0 257 35.8
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 7.3e-25 118.6 240 34.6
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 7.3e-25 118.6 279 35.1
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 1.2e-24 117.9 254 36.2
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 2.1e-24 117.1 236 36.4
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 2.1e-24 117.1 294 32.0
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 2.1e-24 117.1 295 32.9
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 2.1e-24 117.1 190 42.6
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 2.1e-24 117.1 250 36.8
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 2.8e-24 116.7 267 34.5
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 8.1e-24 115.2 184 46.7
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 1.1e-23 114.8 301 30.2
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 2.4e-23 113.6 202 38.1
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 4.0e-23 112.8 216 37.5
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 8.9e-23 111.7 299 33.4
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.5e-22 110.9 184 38.6
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 2.0e-22 110.5 191 39.3
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 4.4e-22 109.4 260 34.6
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 4.4e-22 109.4 201 39.3
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 7.6e-22 108.6 280 32.9
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 1.7e-21 107.5 97 56.7
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 2.2e-21 107.1 250 35.2
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 2.9e-21 106.7 279 32.3
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 2.9e-21 106.7 247 34.8
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 2.9e-21 106.7 191 36.1
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 2.9e-21 106.7 89 57.3
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 3.8e-21 106.3 263 32.3
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 6.4e-21 105.5 253 35.2
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 1.9e-20 104.0 119 43.7
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 3.2e-20 103.2 279 33.0
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 4.2e-20 102.8 125 46.4
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 1.6e-19 100.9 278 32.4
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 2.7e-19 100.1 259 33.6
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 2.7e-19 100.1 247 34.8
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 6.0e-19 99.0 261 33.3
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 1.0e-18 98.2 96 51.0
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 7.3e-17 92.0 222 33.3
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 1.2e-16 91.3 298 29.9
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.8e-16 90.1 81 58.0
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 4.4e-14 82.8 65 61.5
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 9.9e-14 81.6 266 28.2
Lj1P829T26 Lonicera japonica HOM05D006067 ORTHO05D007327 1.1e-12 78.2 124 41.9
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 6.0e-11 72.4 114 36.8
Zm00001eb152520 Zea mays HOM05D006067 ORTHO05D007327 5.6e-09 65.9 102 38.2
Pp3c23_21590 Physcomitrium patens HOM05D006067 ORTHO05D007327 7.3e-09 65.5 134 34.3
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 2.8e-08 63.5 244 26.6
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 8.1e-08 62.0 65 47.7
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 3.4e-06 56.6 64 45.3


User provided reference genes

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