Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 1.1e-120 436.8 240 100.0
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 1.0e-118 430.3 238 99.2
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.3e-105 386.7 243 85.6
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 5.0e-78 295.0 242 70.7
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.5e-69 266.9 238 70.6
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.3e-69 265.8 237 70.9
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.5e-61 240.4 126 94.4
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 5.2e-59 231.9 233 59.7
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 2.6e-58 229.6 170 69.4
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 5.8e-58 228.4 250 55.2
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 1.7e-57 226.9 234 57.7
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 1.7e-57 226.9 241 57.7
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 2.2e-57 226.5 150 73.3
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 3.8e-57 225.7 239 56.1
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 4.9e-57 225.3 247 59.5
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 6.4e-57 224.9 240 55.8
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 1.1e-56 224.2 174 66.1
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 1.1e-56 224.2 239 57.7
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 1.9e-56 223.4 234 56.8
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 5.4e-56 221.9 234 57.7
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 5.4e-56 221.9 191 62.8
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 7.1e-56 221.5 147 74.8
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 1.2e-55 220.7 178 62.9
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 2.7e-55 219.5 184 63.6
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 3.5e-55 219.2 148 72.3
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 3.5e-55 219.2 146 76.0
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 4.6e-55 218.8 151 70.9
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 7.8e-55 218.0 148 70.9
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 1.0e-54 217.6 235 51.9
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 1.0e-54 217.6 150 70.7
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 1.3e-54 217.2 241 56.8
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 1.3e-54 217.2 243 54.3
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.7e-54 216.9 186 61.8
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 3.9e-54 215.7 207 58.0
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 3.9e-54 215.7 241 58.9
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 5.1e-54 215.3 176 62.5
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 8.7e-54 214.5 151 68.9
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 8.7e-54 214.5 245 51.8
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 1.5e-53 213.8 152 73.7
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 3.3e-53 212.6 241 51.9
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 3.3e-53 212.6 196 58.2
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 7.3e-53 211.5 243 53.9
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 1.6e-52 210.3 190 60.0
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 1.6e-52 210.3 220 51.4
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 2.8e-52 209.5 249 53.8
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 4.8e-52 208.8 184 60.9
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 8.1e-52 208.0 241 50.6
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 1.1e-51 207.6 241 51.5
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 1.4e-51 207.2 178 62.4
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 1.8e-51 206.8 150 68.0
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 1.8e-51 206.8 242 50.4
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 1.8e-51 206.8 251 55.4
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 3.1e-51 206.1 144 69.4
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 3.1e-51 206.1 242 51.7
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 3.1e-51 206.1 242 50.0
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 4.0e-51 205.7 149 68.5
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 5.3e-51 205.3 143 69.9
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 9.0e-51 204.5 151 66.9
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 9.0e-51 204.5 150 66.7
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 9.0e-51 204.5 152 67.1
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 9.0e-51 204.5 152 67.1
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 2.0e-50 203.4 145 68.3
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.0e-50 203.4 152 66.4
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 2.6e-50 203.0 143 69.9
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 3.4e-50 202.6 152 65.8
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 3.4e-50 202.6 237 56.1
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 3.4e-50 202.6 240 49.6
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 9.9e-50 201.1 247 48.6
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 9.9e-50 201.1 150 64.7
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 9.9e-50 201.1 177 58.8
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 1.3e-49 200.7 150 65.3
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 1.3e-49 200.7 143 68.5
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 1.3e-49 200.7 143 68.5
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 1.3e-49 200.7 143 68.5
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 1.3e-49 200.7 143 68.5
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 1.3e-49 200.7 143 68.5
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 1.7e-49 200.3 152 65.1
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 2.2e-49 199.9 237 51.1
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 6.4e-49 198.4 219 55.3
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 8.4e-49 198.0 148 66.2
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 4.6e-47 192.2 152 63.2
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 6.0e-47 191.8 151 65.6
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 5.1e-46 188.7 163 60.1
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 1.9e-45 186.8 126 71.4
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 1.9e-45 186.8 151 64.2
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 3.3e-45 186.0 184 55.4
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 2.9e-41 172.9 121 69.4
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 2.4e-40 169.9 124 67.7
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 7.4e-37 158.3 118 66.9
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 9.6e-37 157.9 234 46.2
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 9.6e-37 157.9 125 59.2
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 6.9e-35 151.8 170 49.4
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 6.9e-35 151.8 145 57.2
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.5e-34 150.6 150 53.3
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 5.8e-34 148.7 242 41.7
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 2.2e-33 146.7 172 47.7
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 1.9e-32 143.7 151 47.7
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 2.1e-31 140.2 194 43.8
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 3.9e-30 136.0 144 52.8
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 3.3e-29 132.9 181 45.3
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 1.3e-28 131.0 127 56.7
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 8.2e-28 128.3 88 67.0
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 2.7e-23 113.2 76 69.7
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 2.3e-22 110.2 130 47.7
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 2.5e-21 106.7 66 77.3
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 4.3e-21 105.9 85 61.2
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 2.2e-20 103.6 67 71.6
Actinidia31356 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.1e-16 91.3 105 51.4
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 5.5e-16 89.0 106 47.2
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 4.7e-15 85.9 88 53.4
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 4.7e-15 85.9 66 66.7
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 1.5e-13 80.9 106 46.2
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 3.7e-12 76.3 155 35.5
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 5.3e-11 72.4 42 81.0
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 5.3e-11 72.4 65 55.4
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 2.0e-10 70.5 56 60.7
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 2.0e-10 70.5 90 45.6
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 2.0e-10 70.5 109 41.3
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 5.9e-10 68.9 56 58.9
RcHm_v2.0_Chr5g0021881 Rosa chinensis HOM05D002102 ORTHO05D008242 2.5e-08 63.5 57 52.6
RcHm_v2.0_Chr5g0021951 Rosa chinensis HOM05D002102 ORTHO05D008242 5.5e-08 62.4 55 56.4
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 5.2e-06 55.8 91 39.6


User provided reference genes

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