Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g026410 Solanum pennellii HOM05D000538 ORTHO05D012213 7.7e-62 240.4 125 100.0
Solyc07g052860.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 3.8e-53 211.5 114 95.6
Solyc07g052750.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 7.0e-47 190.7 102 96.1
PGSC0003DMG400026206 Solanum tuberosum HOM05D000538 ORTHO05D012213 4.7e-43 177.9 111 84.7
Sopen07g026370 Solanum pennellii HOM05D000538 ORTHO05D012213 8.8e-42 173.7 102 91.2
Solyc07g052760.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 5.4e-39 164.5 98 84.7
Solyc07g052830.4 Solanum lycopersicum HOM05D000538 ORTHO05D012213 5.4e-39 164.5 105 81.9
PGSC0003DMG400026195 Solanum tuberosum HOM05D000538 ORTHO05D012213 9.1e-39 163.7 104 81.7
Sopen07g026420 Solanum pennellii HOM05D000538 ORTHO05D012213 1.0e-37 160.2 98 82.7
Sopen07g026380 Solanum pennellii HOM05D000538 ORTHO05D012213 1.7e-37 159.5 98 82.7
PGSC0003DMG400026193 Solanum tuberosum HOM05D000538 ORTHO05D012213 2.3e-37 159.1 98 81.6
Solyc07g052900.1 Solanum lycopersicum HOM05D000538 ORTHO05D000614 5.0e-37 157.9 104 77.9
Sopen07g026450 Solanum pennellii HOM05D000538 ORTHO05D012213 5.0e-37 157.9 104 77.9
PGSC0003DMG400026196 Solanum tuberosum HOM05D000538 ORTHO05D000614 5.0e-37 157.9 104 76.0
Sopen07g026360 Solanum pennellii HOM05D000538 ORTHO05D012213 6.1e-35 151.0 103 74.8
Sopen07g026390 Solanum pennellii HOM05D000538 ORTHO05D012213 6.1e-35 151.0 91 83.5
Solyc07g052870.2 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.4e-34 149.8 98 79.6
CAN.G86.22 Capsicum annuum HOM05D000538 ORTHO05D000614 2.8e-32 142.1 104 71.2
Nitab4.5_0003429g0050 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.6e-27 125.2 106 64.2
Peaxi162Scf00007g00141 Petunia axillaris HOM05D000538 ORTHO05D000614 4.0e-26 121.7 105 64.8
Nitab4.5_0001134g0160 Nicotiana tabacum HOM05D000538 ORTHO05D000614 8.9e-26 120.6 100 64.0
CAN.G492.89 Capsicum annuum HOM05D000538 ORTHO05D012213 4.9e-24 114.8 97 60.8
Solyc07g052820.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.9e-23 112.8 64 87.5
CAN.G150.1 Capsicum annuum HOM05D000538 ORTHO05D012213 2.4e-23 112.5 105 55.2
CAN.G2015.5 Capsicum annuum HOM05D000538 ORTHO05D012213 1.6e-22 109.8 105 54.3
Cpa.g.sc8.251 Carica papaya HOM05D000538 ORTHO05D000614 8.9e-10 67.4 106 38.7
Nitab4.5_0000780g0050 Nicotiana tabacum HOM05D000538 ORTHO05D012213 1.2e-09 67.0 100 43.0
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 2.6e-09 65.9 103 37.9
MSTRG.14159 Avicennia marina HOM05D000538 ORTHO05D000614 7.5e-09 64.3 104 42.3
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 1.7e-08 63.2 108 38.0
Solyc07g052740.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 4.9e-08 61.6 42 76.2
Rhsim06G0156300 Rhododendron simsii HOM05D000538 ORTHO05D000614 1.1e-07 60.5 103 39.8
MD09G1103400 Malus domestica HOM05D000538 ORTHO05D000614 2.4e-07 59.3 97 43.3
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 3.2e-07 58.9 95 38.9
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 1.2e-06 57.0 104 31.7
Sed0007057 Sechium edule HOM05D000538 ORTHO05D000614 1.2e-06 57.0 80 40.0
SalBow1G6852 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.6e-06 56.6 106 38.7
Rhsim11G0032500 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.1e-06 56.2 79 41.8
RhsimUnG0059200 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.1e-06 56.2 79 41.8
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 2.7e-06 55.8 96 36.5
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 2.7e-06 55.8 83 42.2
CAN.G6565.1 Capsicum annuum HOM05D000538 ORTHO05D012213 6.0e-06 54.7 44 56.8
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 7.8e-06 54.3 50 48.0
Prupe.3G222100 Prunus persica HOM05D000538 ORTHO05D000614 7.8e-06 54.3 85 40.0
Rhsim11G0046900 Rhododendron simsii HOM05D000538 ORTHO05D000614 7.8e-06 54.3 79 41.8
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 7.8e-06 54.3 80 38.8


User provided reference genes

Program Settings