Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 1.5e-41 173.3 164 100.0
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.1e-30 136.3 71 95.8
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 8.1e-27 124.4 68 94.1
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 2.3e-26 122.9 64 95.3
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.9e-23 113.2 61 93.4
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 1.5e-20 103.6 70 78.6
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 7.3e-20 101.3 67 77.6
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 7.3e-20 101.3 63 79.4
Sopen07g021890 Solanum pennellii HOM05D000004 ORTHO05D006664 9.5e-20 100.9 59 86.4
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 6.2e-19 98.2 64 78.1
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 8.1e-19 97.8 67 74.6
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 8.1e-19 97.8 67 74.6
Solyc04g050445.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.2e-17 94.0 68 79.4
Solyc10g054410.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 6.4e-16 88.2 50 88.0
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.4e-15 86.3 67 62.7
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.2e-15 85.9 59 74.6
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 5.4e-15 85.1 71 60.6
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 9.2e-15 84.3 55 70.9
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.7e-14 82.8 67 59.7
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.5e-14 82.4 68 63.2
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.8e-14 81.3 70 58.6
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.7e-13 80.1 85 55.3
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.7e-13 80.1 51 76.5
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-13 79.7 70 55.7
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.6e-13 78.2 65 60.0
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.7e-13 77.8 67 58.2
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.7e-13 77.8 73 58.9
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 1.1e-12 77.4 46 80.4
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-12 77.4 61 62.3
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-12 77.4 67 56.7
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 1.5e-12 77.0 67 58.2
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.3e-12 75.9 64 57.8
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.3e-12 75.9 64 59.4
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.3e-12 75.9 66 57.6
CAN.G26.44 Capsicum annuum HOM05D003329 ORTHO05D006664 4.3e-12 75.5 45 80.0
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-12 75.5 68 57.4
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-12 75.5 63 60.3
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.6e-12 75.1 61 60.7
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-11 73.6 65 56.9
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.7e-11 72.0 65 55.4
Sopen07g013090 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-11 71.6 37 94.6
Sopen08g005900 Solanum pennellii HOM05D003150 ORTHO05D003532 2.4e-10 69.7 40 85.0
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.1e-10 69.3 50 66.0
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.5e-09 67.0 65 53.8
Peaxi162Scf00225g00104 Petunia axillaris HOM05D003329 ORTHO05D006664 3.4e-09 65.9 64 53.1
Peaxi162Scf00990g00006 Petunia axillaris HOM05D003329 ORTHO05D006664 3.4e-09 65.9 64 53.1
Peaxi162Scf01414g00018 Petunia axillaris HOM05D003329 ORTHO05D006664 3.4e-09 65.9 64 53.1
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.8e-09 65.1 58 55.2
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 7.6e-09 64.7 47 63.8
CAN.G255.13 Capsicum annuum HOM05D003329 ORTHO05D006664 1.3e-08 63.9 40 77.5
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-08 63.9 58 51.7
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-08 63.9 51 56.9
Peaxi162Scf00171g00215 Petunia axillaris HOM05D003329 ORTHO05D006664 1.7e-08 63.5 69 50.7
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.9e-08 62.8 66 48.5
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-08 62.4 45 64.4
Peaxi162Scf00021g00075 Petunia axillaris HOM05D003329 ORTHO05D006664 4.9e-08 62.0 70 50.0
CAN.G3481.2 Capsicum annuum HOM05D003329 ORTHO05D006664 8.4e-08 61.2 34 79.4
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.4e-08 61.2 64 54.7
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 8.4e-08 61.2 68 48.5
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-07 60.8 46 63.0
Peaxi162Scf00765g00129 Petunia axillaris HOM05D003329 ORTHO05D006664 2.4e-07 59.7 54 57.4
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 2.4e-07 59.7 50 60.0
CAN.G675.4 Capsicum annuum HOM05D000040 ORTHO05D009963 4.2e-07 58.9 35 80.0
Peaxi162Scf00237g01212 Petunia axillaris HOM05D003329 ORTHO05D006664 9.3e-07 57.8 51 56.9
Peaxi162Scf00174g00315 Petunia axillaris HOM05D003329 ORTHO05D001349 1.2e-06 57.4 65 44.6
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-06 57.0 47 59.6
Nitab4.5_0003338g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.6e-06 57.0 46 58.7
Peaxi162Scf00025g02431 Petunia axillaris HOM05D003329 ORTHO05D006664 1.6e-06 57.0 79 43.0
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 6.0e-06 55.1 68 42.6
Nitab4.5_0003774g0080 Nicotiana tabacum HOM05D003329 ORTHO05D001349 7.8e-06 54.7 56 51.8
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 7.8e-06 54.7 53 43.4


User provided reference genes

Program Settings