Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g016580 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-91 337.8 153 100.0
PGSC0003DMG400027303 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-27 126.3 150 41.3
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.0e-23 111.7 150 36.7
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 6.6e-23 111.3 152 34.9
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.3e-22 109.0 145 35.9
PGSC0003DMG400013620 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.3e-22 107.8 150 36.0
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.9e-18 95.9 111 41.4
PGSC0003DMG400009750 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.9e-18 95.1 118 43.2
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.1e-17 94.0 148 34.5
Sopen03g024660 Solanum pennellii HOM05D000268 ORTHO05D000261 9.2e-17 90.9 130 33.1
PGSC0003DMG403018810 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.2e-16 90.5 92 47.8
Sopen02g033120 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-16 90.1 108 38.9
PGSC0003DMG400011299 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.5e-16 89.0 104 43.3
Sopen11g019660 Solanum pennellii HOM05D000003 ORTHO05D000004 6.0e-16 88.2 106 36.8
PGSC0003DMG400017390 Solanum tuberosum HOM05D005309 ORTHO05D006648 1.3e-15 87.0 87 42.5
PGSC0003DMG400025951 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.7e-15 86.7 79 49.4
PGSC0003DMG400014038 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.0e-15 85.9 91 41.8
Nitab4.5_0002005g0080 Nicotiana tabacum HOM05D003008 ORTHO05D003346 9.5e-14 80.9 79 45.6
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-12 75.1 113 36.3
QL05p062602 Quercus lobata HOM05D001008 ORTHO05D009098 1.5e-11 73.6 151 32.5
MBI01_g39982_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.6e-11 72.8 154 31.8
MBI14_g15700_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.4e-11 72.4 141 31.2
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 9.9e-11 70.9 98 34.7
MBI01_g01229_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D000004 1.3e-10 70.5 153 30.7
QL10p021333 Quercus lobata HOM05D000003 ORTHO05D000004 2.2e-10 69.7 145 30.3
Cpa.g.sc1512.2 Carica papaya HOM05D000003 ORTHO05D000004 2.9e-10 69.3 106 36.8
MBI05_g11580_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.9e-10 69.3 138 31.2
MBI07_g44865_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.9e-10 69.3 126 35.7
CSS0022804 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-10 68.9 157 32.5
MBI18_g25516_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.8e-10 68.9 137 32.8
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 4.9e-10 68.6 156 30.8
CSS0025653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.4e-10 68.2 160 30.6
Oeu040057.1 Olea europaea HOM05D000003 ORTHO05D000004 6.4e-10 68.2 130 33.8
MBI05_g25766_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D000924 8.4e-10 67.8 128 32.8
PSO063G6362 Papaver somniferum HOM05D000003 ORTHO05D000651 8.4e-10 67.8 148 31.1
MBI12_g01749_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-09 67.4 128 28.1
MBI15_g31430_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-09 67.4 141 29.8
MBI18_g01515_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-09 67.4 144 29.9
MBI16_g12467_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.9e-09 66.6 123 32.5
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-09 66.6 151 30.5
PGSC0003DMG400002738 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.9e-09 66.6 80 41.2
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 4.1e-09 65.5 93 35.5
MBI02_g15381_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.1e-09 65.5 100 35.0
PSO339G2522 Papaver somniferum HOM05D000003 ORTHO05D000651 4.1e-09 65.5 112 33.0
PSO063G7644 Papaver somniferum HOM05D000003 ORTHO05D000651 5.4e-09 65.1 139 29.5
Cpa.g.sc140.5 Carica papaya HOM05D000003 ORTHO05D000004 7.1e-09 64.7 96 42.7
MBI17_g42678_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.1e-09 64.7 143 28.0
QL01p019206 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-09 64.7 151 29.8
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 7.1e-09 64.7 151 29.8
QL09p047247 Quercus lobata HOM05D000003 ORTHO05D001231 9.2e-09 64.3 128 30.5
MBI16_g27832_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-08 63.9 109 31.2
MBI18_g01966_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-08 63.9 138 30.4
MBI16_g10452_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D003186 1.6e-08 63.5 146 30.1
PSO063G2541 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-08 63.5 131 28.2
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 2.1e-08 63.2 151 29.1
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-08 63.2 151 29.8
MBI06_g35598_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.7e-08 62.8 103 35.0
PSO675G7901 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-08 62.4 119 30.3
Hund13112 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.5e-08 62.4 105 32.4
PGSC0003DMG400008126 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.6e-08 62.0 62 41.9
PSO170G5548 Papaver somniferum HOM05D000003 ORTHO05D000651 6.0e-08 61.6 149 27.5
MBI10_g47168_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.8e-08 61.2 119 31.9
MBI19_g12139_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.8e-08 61.2 119 31.1
PSO339G5880 Papaver somniferum HOM05D000003 ORTHO05D000651 7.8e-08 61.2 147 25.9
Aqoxy2G01460 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.0e-07 60.8 150 27.3
MBI14_g42848_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.0e-07 60.8 118 28.0
PSO423G0162 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-07 60.8 127 28.3
Aqoxy3G02214 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-07 60.5 137 32.1
MBI11_g37079_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-07 60.5 146 31.5
MBI18_g10205_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-07 60.5 126 29.4
QL07p031183 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-07 60.5 111 30.6
QL12p007933 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-07 60.1 117 33.3
Cpa.g.sc33.44 Carica papaya HOM05D000003 ORTHO05D000004 2.3e-07 59.7 121 31.4
MBI15_g26082_MAGBIO Magnolia biondii HOM05D000122 ORTHO05D000139 2.3e-07 59.7 133 30.1
Os02g0118800 Oryza sativa ssp. japonica HOM05D019224 ORTHO05D012385 2.3e-07 59.7 101 32.7
PSO764G0074 Papaver somniferum HOM05D000003 ORTHO05D000651 2.3e-07 59.7 139 28.1
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-07 59.7 144 27.8
Aqoxy3G00653 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-07 59.3 107 30.8
Cpa.g.sc73.80 Carica papaya HOM05D000003 ORTHO05D000004 5.1e-07 58.5 107 30.8
PSO210G1472 Papaver somniferum HOM05D000003 ORTHO05D000651 5.1e-07 58.5 148 27.7
QL03p044068 Quercus lobata HOM05D000147 ORTHO05D005311 5.1e-07 58.5 117 32.5
RcHm_v2.0_Chr7g0206171 Rosa chinensis HOM05D005989 ORTHO05D000022 5.1e-07 58.5 94 34.0
QL06p025333 Quercus lobata HOM05D002747 ORTHO05D003069 6.6e-07 58.2 112 33.9
QL08p031150 Quercus lobata HOM05D000468 ORTHO05D000548 6.6e-07 58.2 106 31.1
MBI02_g23961_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.6e-07 57.8 90 34.4
MBI12_g03908_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.6e-07 57.8 103 32.0
Oeu032320.1 Olea europaea HOM05D000003 ORTHO05D000004 8.6e-07 57.8 87 34.5
PSO170G1223 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-07 57.8 93 32.3
QL11p057128 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-07 57.8 133 30.8
SHI34097 Sapria himalayana HOM05D000003 ORTHO05D000004 8.6e-07 57.8 135 28.1
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-06 57.4 157 27.4
CANSAT56G2889 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.4 99 34.3
MBI09_g18615_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.1e-06 57.4 105 32.4
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 110 31.8
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 110 31.8
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 110 31.8
Hund13413 Selenicereus undatus HOM05D000003 ORTHO05D000004 1.1e-06 57.4 117 29.9
Aqoxy3G03041 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 57.0 134 25.4
Aqoxy4G00919 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-06 57.0 137 29.2
MBI17_g19799_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.9e-06 56.6 103 33.0
PSO063G5291 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-06 56.6 149 26.2
PSO478G0305 Papaver somniferum HOM05D000003 ORTHO05D000651 1.9e-06 56.6 149 25.5
Aqoxy2G01404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.5e-06 56.2 102 29.4
Aqoxy3G01792 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.5e-06 56.2 97 32.0
MBI02_g23408_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.5e-06 56.2 120 29.2
QL06p003940 Quercus lobata HOM05D002900 ORTHO05D014254 2.5e-06 56.2 92 34.8
QL11p024822 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-06 56.2 141 29.8
AUR62030085 Chenopodium quinoa HOM05D000003 ORTHO05D013019 3.3e-06 55.8 103 30.1
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 3.3e-06 55.8 128 25.8
CSS0011681 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-06 55.5 75 40.0
MBI05_g33091_MAGBIO Magnolia biondii HOM05D000706 ORTHO05D001633 4.3e-06 55.5 72 36.1
PSO339G2636 Papaver somniferum HOM05D000003 ORTHO05D000651 5.6e-06 55.1 151 25.8
QL03p003637 Quercus lobata HOM05D001540 ORTHO05D001520 5.6e-06 55.1 94 33.0
MBI18_g38519_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.6e-06 54.3 70 35.7
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 9.6e-06 54.3 108 30.6


User provided reference genes

Program Settings