Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g033720 Solanum pennellii HOM05D010581 ORTHO05D012655 1.3e-185 652.9 316 100.0
Solyc06g082340.2 Solanum lycopersicum HOM05D010581 ORTHO05D012655 5.8e-175 617.5 341 90.3
PGSC0003DMG400030458 Solanum tuberosum HOM05D010581 ORTHO05D012655 7.1e-96 354.8 244 77.0
Nitab4.5_0002768g0030 Nicotiana tabacum HOM05D010581 ORTHO05D012655 7.1e-80 301.6 330 52.4
Peaxi162Scf00390g00723 Petunia axillaris HOM05D010581 ORTHO05D012655 2.5e-77 293.1 349 50.4
Peaxi162Scf00390g00067 Petunia axillaris HOM05D010581 ORTHO05D012655 1.6e-76 290.4 349 49.6
Solyc06g082330.1 Solanum lycopersicum HOM05D010581 ORTHO05D012655 1.3e-65 254.2 344 46.5
CAN.G309.74 Capsicum annuum HOM05D010581 ORTHO05D012655 3.4e-58 229.6 352 41.2
PGSC0003DMG400035274 Solanum tuberosum HOM05D010581 ORTHO05D012655 2.5e-56 223.4 342 42.1
PGSC0003DMG400018582 Solanum tuberosum HOM05D010581 ORTHO05D012655 7.4e-53 211.8 332 40.7
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 5.9e-50 202.2 313 41.2
CAN.G309.69 Capsicum annuum HOM05D010581 ORTHO05D012655 1.8e-43 180.6 344 37.8
Nitab4.5_0000559g0030 Nicotiana tabacum HOM05D010581 ORTHO05D012655 1.2e-42 177.9 309 38.5
Solyc10g076640.1 Solanum lycopersicum HOM05D010581 ORTHO05D012655 2.8e-36 156.8 341 37.0
CAN.G309.71 Capsicum annuum HOM05D010581 ORTHO05D012655 8.8e-30 135.2 269 36.4
CAN.G394.125 Capsicum annuum HOM05D010581 ORTHO05D012655 3.2e-24 116.7 179 40.8
Nitab4.5_0006020g0010 Nicotiana tabacum HOM05D010581 ORTHO05D012655 2.5e-16 90.5 232 30.2
Nitab4.5_0009741g0050 Nicotiana tabacum HOM05D010581 ORTHO05D012655 2.3e-14 84.0 68 58.8
CAN.G309.75 Capsicum annuum HOM05D000096 ORTHO05D012655 4.5e-10 69.7 186 31.2
PSO832G3529 Papaver somniferum HOM05D000007 ORTHO05D000676 2.1e-07 60.8 118 33.9
PSO832G0591 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-06 58.2 119 31.1
CAN.G309.68 Capsicum annuum HOM05D010581 ORTHO05D012655 1.8e-06 57.8 124 33.1
CANSAT78G1762 Cannabis sativa HOM05D000007 ORTHO05D000521 3.0e-06 57.0 205 26.8
Medtr3g030320 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-06 57.0 94 31.9
PSO135G0114 Papaver somniferum HOM05D000007 ORTHO05D000676 4.0e-06 56.6 95 36.8
Lsat_1_v5_gn_9_104300 Lactuca sativa HOM05D000007 ORTHO05D000521 5.2e-06 56.2 117 29.1
PSO063G5494 Papaver somniferum HOM05D000007 ORTHO05D000676 8.9e-06 55.5 136 28.7
PSO081G0128 Papaver somniferum HOM05D000007 ORTHO05D000676 8.9e-06 55.5 131 28.2
PSO832G1354 Papaver somniferum HOM05D000007 ORTHO05D000676 8.9e-06 55.5 92 32.6
PSO832G1570 Papaver somniferum HOM05D000007 ORTHO05D000676 8.9e-06 55.5 92 32.6
PSO832G3443 Papaver somniferum HOM05D000007 ORTHO05D000676 8.9e-06 55.5 92 32.6


User provided reference genes

Program Settings