Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g001640 Solanum pennellii HOM05D014857 ORTHO05D015078 0.0e+00 1136.3 598 100.0
Solyc06g005660.3 Solanum lycopersicum HOM05D014857 ORTHO05D015078 4.1e-302 1040.8 581 95.5
PGSC0003DMG400002154 Solanum tuberosum HOM05D014857 ORTHO05D015078 8.6e-228 793.9 588 77.0
Peaxi162Scf00122g00211 Petunia axillaris HOM05D014857 ORTHO05D015078 5.2e-124 449.1 635 51.3
Nitab4.5_0000880g0010 Nicotiana tabacum HOM05D014857 ORTHO05D015078 7.6e-75 285.8 601 40.4
Nitab4.5_0000272g0020 Nicotiana tabacum HOM05D014857 ORTHO05D015078 1.7e-45 188.3 661 31.9
DCAR_015272 Daucus carota HOM05D003265 ORTHO05D015078 1.7e-29 135.2 692 28.6
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 1.2e-27 129.0 743 27.7
vmacro07090 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 3.0e-23 114.4 691 27.2
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.4e-22 110.9 733 26.6
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 2.2e-21 108.2 640 28.4
Cc09_g02720 Coffea canephora HOM05D014857 ORTHO05D015078 2.0e-19 101.7 573 28.8
Lsat_1_v5_gn_9_68001 Lactuca sativa HOM05D014857 ORTHO05D015078 2.7e-19 101.3 455 28.4
HanXRQChr09g0246531 Helianthus annuus HOM05D014857 ORTHO05D015078 1.0e-18 99.4 461 28.9
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.8e-15 86.7 719 25.5
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.7e-13 82.0 709 25.4
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 1.1e-12 79.3 142 43.0
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 9.2e-12 76.3 664 25.5
CSS0011554 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 8.6e-10 69.7 106 41.5
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 4.3e-09 67.4 143 37.8
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 5.6e-09 67.0 158 34.8
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 2.1e-08 65.1 135 35.6
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.8e-08 64.7 123 39.0
Sed0024874 Sechium edule HOM05D003265 ORTHO05D003819 3.6e-08 64.3 427 28.8
CSS0047156 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.7e-08 63.9 102 40.2
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 4.7e-08 63.9 192 34.4
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 4.7e-08 63.9 135 37.0
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 4.7e-08 63.9 135 34.8
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 8.0e-08 63.2 129 38.0
CsaV3_3G035550 Cucumis sativus L. HOM05D003265 ORTHO05D003819 2.3e-07 61.6 457 26.3
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 3.1e-07 61.2 134 39.6
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 4.0e-07 60.8 719 23.6
Actinidia05272 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.8e-07 60.1 129 37.2
Sp5g09010 Schrenkiella parvula HOM05D003265 ORTHO05D003819 6.8e-07 60.1 145 37.9
Ciclev10011133m.g Citrus clementina HOM05D003265 ORTHO05D003819 8.9e-07 59.7 143 35.7
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 8.9e-07 59.7 153 34.0
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.2e-06 59.3 394 26.9
THA.LOC104806495 Tarenaya hassleriana HOM05D003265 ORTHO05D003819 1.2e-06 59.3 141 40.4
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.2e-06 59.3 149 34.9
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 1.5e-06 58.9 129 36.4
Aa31LG10G8510 Aethionema arabicum HOM05D003265 ORTHO05D003819 2.0e-06 58.5 133 39.8
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 2.0e-06 58.5 76 48.7
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 3.4e-06 57.8 65 49.2
CSS0009096 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.4e-06 57.8 408 29.4
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 5.8e-06 57.0 651 23.3
Thhalv10010259m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 7.5e-06 56.6 146 33.6
SHI12573 Sapria himalayana HOM05D003265 ORTHO05D003819 7.5e-06 56.6 136 33.1
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 7.5e-06 56.6 168 32.7
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 9.8e-06 56.2 46 58.7


User provided reference genes

Program Settings