Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 7.3e-256 886.7 444 100.0
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 2.1e-226 788.9 446 90.1
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 2.3e-225 785.4 435 92.6
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 3.8e-212 741.5 443 82.2
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.2e-181 640.2 437 75.3
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 5.5e-179 631.3 438 74.0
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 1.7e-164 583.2 442 63.3
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 1.6e-162 576.6 446 64.6
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.4e-161 573.5 418 67.9
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 2.0e-157 559.7 399 65.2
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 7.7e-157 557.8 403 67.5
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 2.2e-156 556.2 429 64.3
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 6.5e-156 554.7 426 63.4
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 7.2e-155 551.2 403 64.0
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 3.6e-154 548.9 402 64.7
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 8.0e-154 547.7 448 59.6
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 1.4e-153 547.0 442 59.5
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 2.3e-153 546.2 446 61.9
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 5.2e-153 545.0 414 63.5
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 2.0e-152 543.1 409 63.1
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 2.6e-152 542.7 435 61.1
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 1.3e-151 540.4 411 62.3
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 2.2e-151 539.7 442 60.4
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 2.8e-151 539.3 422 61.4
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 4.8e-151 538.5 445 59.1
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.1e-150 537.3 404 63.1
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 1.8e-150 536.6 404 62.6
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 2.4e-150 536.2 419 62.8
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 5.4e-150 535.0 404 62.6
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 5.4e-150 535.0 436 61.9
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.0e-149 533.1 365 65.5
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 2.0e-149 533.1 418 62.0
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 4.5e-149 531.9 415 60.7
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 5.9e-149 531.6 472 58.5
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 1.7e-148 530.0 453 60.0
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 2.9e-148 529.3 448 58.9
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 5.0e-148 528.5 420 60.7
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 6.6e-148 528.1 397 62.2
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 8.6e-148 527.7 442 58.4
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 4.2e-147 525.4 445 57.1
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 9.5e-147 524.2 370 65.7
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 1.6e-146 523.5 417 59.5
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 2.1e-146 523.1 406 62.8
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 2.1e-146 523.1 392 63.3
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 2.1e-146 523.1 444 57.7
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.8e-146 522.7 413 60.3
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 4.7e-146 521.9 370 65.7
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 1.4e-145 520.4 412 61.4
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 3.0e-145 519.2 437 59.3
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.0e-145 519.2 440 57.3
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 8.9e-145 517.7 401 62.1
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 8.9e-145 517.7 413 59.3
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 1.2e-144 517.3 368 66.8
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 1.2e-144 517.3 372 64.0
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 2.0e-144 516.5 411 59.6
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.0e-144 516.5 406 61.6
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.0e-144 516.5 410 60.5
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 2.0e-144 516.5 404 62.4
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.7e-143 513.5 409 60.1
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 3.7e-143 512.3 423 58.9
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 3.7e-143 512.3 409 59.9
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 6.3e-143 511.5 421 57.7
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.4e-142 510.4 405 60.5
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 2.4e-142 509.6 410 58.8
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 5.4e-142 508.4 402 58.5
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 7.0e-142 508.1 397 60.2
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 7.0e-142 508.1 417 58.3
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.2e-141 507.3 453 56.7
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 1.6e-141 506.9 452 55.3
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 2.7e-141 506.1 404 57.9
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 5.9e-141 505.0 426 58.2
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 1.7e-140 503.4 417 57.3
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 2.3e-140 503.1 417 58.8
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 1.1e-139 500.7 325 71.1
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 1.5e-139 500.4 401 60.8
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.9e-139 500.0 398 61.6
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 7.3e-139 498.0 419 57.8
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 2.8e-138 496.1 459 55.3
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 1.0e-137 494.2 393 62.3
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 1.5e-136 490.3 537 50.1
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 2.0e-136 490.0 407 61.7
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.3e-135 487.3 437 55.4
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 2.9e-135 486.1 438 54.6
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 3.7e-135 485.7 437 55.1
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 6.4e-135 485.0 397 58.2
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 8.3e-135 484.6 437 54.7
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 3.2e-134 482.6 437 55.4
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 3.2e-134 482.6 393 59.5
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 2.0e-133 479.9 351 64.4
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 1.9e-131 473.4 409 57.2
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 8.3e-127 458.0 325 65.5
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 2.4e-126 456.4 368 59.0
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 9.2e-126 454.5 439 52.6
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 4.7e-122 442.2 419 55.8
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 2.1e-109 400.2 317 59.6
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 3.6e-106 389.4 438 52.7
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 1.2e-96 357.8 257 64.2
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 4.5e-96 355.9 335 51.0
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 3.8e-95 352.8 368 46.7
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 9.0e-89 331.6 344 49.4
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.9e-86 323.9 414 41.5
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.6e-85 320.9 262 59.9
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.9e-83 313.9 340 47.9
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.8e-82 310.1 336 47.9
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 5.1e-76 289.3 403 39.0
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.5e-64 251.1 244 54.1
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 3.3e-59 233.4 379 33.5
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 2.5e-54 217.2 119 87.4
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 3.3e-51 206.8 186 54.8
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 1.2e-40 171.8 130 60.0
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 2.0e-32 144.4 136 52.9
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.3e-18 98.6 50 86.0
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 1.6e-13 81.6 59 59.3
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 4.3e-06 57.0 52 51.9


User provided reference genes

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