Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g010770 Solanum pennellii HOM05D038647 ORTHO05D024814 1.4e-118 429.5 199 100.0
PGSC0003DMG400029111 Solanum tuberosum HOM05D038647 ORTHO05D024814 1.0e-68 263.8 129 90.7
PGSC0003DMG400040438 Solanum tuberosum HOM05D000664 ORTHO05D000491 1.4e-20 104.0 158 41.1
Solyc05g051595.1 Solanum lycopersicum HOM05D000664 ORTHO05D024814 3.0e-20 102.8 161 40.4
CAN.G937.10 Capsicum annuum HOM05D000664 ORTHO05D024814 7.5e-19 98.2 155 38.1
Lj7C282T19 Lonicera japonica HOM05D000664 ORTHO05D000491 3.4e-11 72.8 211 28.9
Nitab4.5_0000375g0090 Nicotiana tabacum HOM05D000664 ORTHO05D000491 1.7e-10 70.5 203 28.6
DCAR_028594 Daucus carota HOM05D000664 ORTHO05D000491 2.9e-10 69.7 150 32.0
CANSAT56G1457 Cannabis sativa HOM05D000664 ORTHO05D000491 3.7e-10 69.3 166 29.5
Solyc05g051583.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 8.3e-10 68.2 201 29.9
Dinv16863 Davidia involucrata HOM05D000664 ORTHO05D000491 1.1e-09 67.8 153 32.0
RcHm_v2.0_Chr2g0174531 Rosa chinensis HOM05D000664 ORTHO05D000491 1.9e-09 67.0 158 31.0
FAN02G0794 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.4e-09 66.6 155 31.0
Lj3A384G19 Lonicera japonica HOM05D000664 ORTHO05D000491 2.4e-09 66.6 162 32.1
Rhsim03G0161800 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.4e-09 66.6 227 29.5
Rhsim11G0068800 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.4e-09 66.6 193 25.9
Atru.chr1.884 Acer truncatum HOM05D000664 ORTHO05D000491 3.2e-09 66.2 156 30.1
COL.COLO4_37360 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.2e-09 66.2 219 29.7
FvH4_6g52062 Fragaria vesca HOM05D000664 ORTHO05D000491 4.1e-09 65.9 210 27.6
FvH4_6g52080 Fragaria vesca HOM05D000664 ORTHO05D000491 4.1e-09 65.9 210 27.6
FvH4_6g52942 Fragaria vesca HOM05D000664 ORTHO05D000491 4.1e-09 65.9 194 28.4
FAN14G3989 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.1e-09 65.9 194 28.4
FAN14G0409 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.4e-09 65.5 231 24.7
PSO541G4226 Papaver somniferum HOM05D000664 ORTHO05D000491 5.4e-09 65.5 161 30.4
FvH4_6g53610 Fragaria vesca HOM05D000664 ORTHO05D000491 7.0e-09 65.1 231 24.7
Solyc05g015460.3 Solanum lycopersicum HOM05D038647 ORTHO05D024814 7.0e-09 65.1 28 96.4
FAN09G2634 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.2e-09 64.7 210 27.6
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.2e-09 64.7 210 27.6
COL.COLO4_37350 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.2e-08 64.3 172 29.1
FAN05G1881 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.2e-08 64.3 166 30.1
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 1.6e-08 63.9 154 32.5
PGR044G0383 Punica granatum HOM05D000664 ORTHO05D000491 1.6e-08 63.9 206 28.6
PGSC0003DMG400007221 Solanum tuberosum HOM05D000664 ORTHO05D000491 1.6e-08 63.9 197 27.9
Peaxi162Scf00906g00227 Petunia axillaris HOM05D000856 ORTHO05D001792 2.0e-08 63.5 104 39.4
Ciclev10005096m.g Citrus clementina HOM05D000664 ORTHO05D000491 2.7e-08 63.2 148 33.8
COL.COLO4_37361 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.7e-08 63.2 200 30.0
Migut.F01252 Erythranthe guttata HOM05D000664 ORTHO05D000491 2.7e-08 63.2 150 30.0
RhsimUnG0092200 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.7e-08 63.2 192 24.0
FvH4_6g53021 Fragaria vesca HOM05D000664 ORTHO05D000491 3.5e-08 62.8 175 29.1
FAN14G3348 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.5e-08 62.8 173 27.7
Lj5C690T4 Lonicera japonica HOM05D000664 ORTHO05D000491 4.6e-08 62.4 216 28.2
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.6e-08 62.4 146 30.8
Hma1.2p1_0432F.1_g152020 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 6.0e-08 62.0 163 30.1
COL.COLO4_37348 Corchorus olitorius HOM05D000664 ORTHO05D000491 7.8e-08 61.6 160 31.9
FvH4_6g52931 Fragaria vesca HOM05D000664 ORTHO05D000491 1.0e-07 61.2 166 28.3
Lj5P697T4 Lonicera japonica HOM05D000664 ORTHO05D000491 1.0e-07 61.2 216 27.3
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.0e-07 61.2 145 30.3
PSO782G1217 Papaver somniferum HOM05D000664 ORTHO05D000491 1.3e-07 60.8 210 26.7
Actinidia31674 Actinidia chinensis HOM05D000664 ORTHO05D000491 1.7e-07 60.5 176 30.1
COL.COLO4_37366 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.7e-07 60.5 165 29.1
FAN09G3500 Fragaria x ananassa HOM05D002893 ORTHO05D003387 1.7e-07 60.5 219 26.5
Migut.F01199 Erythranthe guttata HOM05D000664 ORTHO05D000491 2.3e-07 60.1 107 35.5
FvH4_6g52830 Fragaria vesca HOM05D000664 ORTHO05D000491 2.3e-07 60.1 149 28.9
FvH4_6g52861 Fragaria vesca HOM05D000664 ORTHO05D000491 2.3e-07 60.1 149 28.9
FAN05G4782 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.3e-07 60.1 108 34.3
FvH4_3g43790 Fragaria vesca HOM05D000664 ORTHO05D000491 3.0e-07 59.7 152 30.3
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.0e-07 59.7 204 27.0
FAN14G3826 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.0e-07 59.7 149 28.9
Manes.01G166900 Manihot esculenta HOM05D000664 ORTHO05D000491 3.0e-07 59.7 209 28.2
PGSC0003DMG400007218 Solanum tuberosum HOM05D000664 ORTHO05D000491 3.0e-07 59.7 200 28.0
Lj3A390G10 Lonicera japonica HOM05D000664 ORTHO05D000491 3.9e-07 59.3 85 41.2
Dinv09433 Davidia involucrata HOM05D000664 ORTHO05D000491 5.0e-07 58.9 92 40.2
Rhsim03G0162200 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.0e-07 58.9 193 25.9
Hma1.2p1_1404F.1_g281330 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 6.6e-07 58.5 157 30.6
Rhsim01G0017000 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.6e-07 58.2 164 30.5
SGA_v2.0_scaffold136G35030 Striga asiatica HOM05D000664 ORTHO05D000491 8.6e-07 58.2 157 29.3
Hma1.2p1_1404F.1_g281360 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 1.1e-06 57.8 150 32.0
PSO170G3399 Papaver somniferum HOM05D000664 ORTHO05D000491 1.1e-06 57.8 187 25.1
Prupe.1G066100 Prunus persica HOM05D000664 ORTHO05D000491 1.1e-06 57.8 156 29.5
PGSC0003DMG400021824 Solanum tuberosum HOM05D000664 ORTHO05D000491 1.1e-06 57.8 151 30.5
A03p03400 Brassica napus HOM05D000664 ORTHO05D000491 1.5e-06 57.4 198 26.8
CSS0037447 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.5e-06 57.4 169 26.6
Migut.F01253 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.5e-06 57.4 93 35.5
Migut.J01669 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.5e-06 57.4 147 29.9
Nn8g41006 Nelumbo nucifera HOM05D000664 ORTHO05D000491 1.5e-06 57.4 200 31.0
QL11p009388 Quercus lobata HOM05D000664 ORTHO05D000491 1.5e-06 57.4 155 29.0
FvH4_6g53660 Fragaria vesca HOM05D000664 ORTHO05D000491 1.9e-06 57.0 154 28.6
RcHm_v2.0_Chr4g0396041 Rosa chinensis HOM05D000664 ORTHO05D000491 1.9e-06 57.0 160 30.0
RcHm_v2.0_Chr6g0264241 Rosa chinensis HOM05D000664 ORTHO05D000491 1.9e-06 57.0 89 37.1
TAR626G1237 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.9e-06 57.0 68 47.1
BolC3t12919H Brassica oleracea HOM05D000664 ORTHO05D000491 2.5e-06 56.6 181 29.3
FAN21G0725 Fragaria x ananassa HOM05D000026 ORTHO05D000491 2.5e-06 56.6 198 26.8
PSO210G6997 Papaver somniferum HOM05D000664 ORTHO05D000491 2.5e-06 56.6 184 28.3
RcHm_v2.0_Chr2g0174451 Rosa chinensis HOM05D000664 ORTHO05D000491 3.3e-06 56.2 149 28.9
Thecc.06G054800 Theobroma cacao HOM05D000664 ORTHO05D000491 3.3e-06 56.2 221 27.1
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 3.3e-06 56.2 160 30.0
FAN09G2913 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.3e-06 55.8 169 27.2
Gohir.A11G278000 Gossypium hirsutum HOM05D000664 ORTHO05D000491 4.3e-06 55.8 207 24.6
Lj5P683G12 Lonicera japonica HOM05D000664 ORTHO05D000491 4.3e-06 55.8 188 27.1
PSO541G6413 Papaver somniferum HOM05D000664 ORTHO05D000491 4.3e-06 55.8 160 29.4
Rhsim11G0069100 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.3e-06 55.8 89 34.8
AT5G07610 Arabidopsis thaliana HOM05D000664 ORTHO05D000491 5.6e-06 55.5 174 28.2
BcaB01g05705 Brassica carinata HOM05D000664 ORTHO05D000491 5.6e-06 55.5 164 29.3
Migut.F01251 Erythranthe guttata HOM05D000664 ORTHO05D000491 5.6e-06 55.5 107 32.7
Migut.F01254 Erythranthe guttata HOM05D000664 ORTHO05D000491 5.6e-06 55.5 83 37.3
FAN09G3133 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.6e-06 55.5 212 26.4
Thecc.03G149500 Theobroma cacao HOM05D000664 ORTHO05D000491 5.6e-06 55.5 193 29.0
C03p03840 Brassica napus HOM05D000664 ORTHO05D000491 7.3e-06 55.1 185 29.2
CSS0031662 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 7.3e-06 55.1 102 37.3
Lsat_1_v5_gn_2_127801 Lactuca sativa HOM05D000664 ORTHO05D000491 7.3e-06 55.1 158 29.1
PSO541G3103 Papaver somniferum HOM05D000664 ORTHO05D000491 7.3e-06 55.1 134 26.9
RcHm_v2.0_Chr2g0174881 Rosa chinensis HOM05D000664 ORTHO05D000491 7.3e-06 55.1 93 34.4
RcHm_v2.0_Chr2g0174951 Rosa chinensis HOM05D000664 ORTHO05D000491 7.3e-06 55.1 93 34.4
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 7.3e-06 55.1 191 27.2
SGA_v2.0_scaffold69G23237 Striga asiatica HOM05D000664 ORTHO05D000491 7.3e-06 55.1 164 26.8
COL.COLO4_32999 Corchorus olitorius HOM05D000664 ORTHO05D000491 9.5e-06 54.7 107 38.3
FAN14G1625 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.5e-06 54.7 202 26.2
Lsat_1_v5_gn_9_51461 Lactuca sativa HOM05D000664 ORTHO05D000491 9.5e-06 54.7 208 25.0
PSO170G1835 Papaver somniferum HOM05D000664 ORTHO05D000491 9.5e-06 54.7 147 28.6
PSO325G0007 Papaver somniferum HOM05D000664 ORTHO05D000491 9.5e-06 54.7 147 28.6


User provided reference genes

Program Settings