Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g004280 Solanum pennellii HOM05D018540 ORTHO05D009989 1.9e-158 562.8 358 100.0
Solyc04g009160.4 Solanum lycopersicum HOM05D018540 ORTHO05D009989 7.9e-152 540.8 354 94.4
PGSC0003DMG401032547 Solanum tuberosum HOM05D018540 ORTHO05D009989 1.4e-127 460.3 357 83.8
CAN.G194.6 Capsicum annuum HOM05D018540 ORTHO05D009989 2.2e-114 416.4 362 76.0
Nitab4.5_0000129g0300 Nicotiana tabacum HOM05D018540 ORTHO05D009989 2.2e-101 373.2 361 74.0
Nitab4.5_0001419g0040 Nicotiana tabacum HOM05D018540 ORTHO05D009989 4.2e-97 359.0 363 69.1
Peaxi162Scf00329g00616 Petunia axillaris HOM05D018540 ORTHO05D009989 1.0e-82 311.2 360 69.2
Oeu006352.1 Olea europaea HOM05D008035 ORTHO05D009989 1.9e-12 77.8 165 38.8
Dinv19126 Davidia involucrata HOM05D008035 ORTHO05D009989 3.2e-12 77.0 395 26.6
Thecc.02G310100 Theobroma cacao HOM05D008035 ORTHO05D009989 5.5e-12 76.3 167 37.1
Cpa.g.sc47.48 Carica papaya HOM05D008035 ORTHO05D009989 1.4e-10 71.6 169 34.3
Actinidia13747 Actinidia chinensis HOM05D008035 ORTHO05D009989 3.0e-10 70.5 362 25.4
FAN17G2557 Fragaria x ananassa HOM05D008035 ORTHO05D009989 1.5e-09 68.2 387 25.1
Manes.07G076000 Manihot esculenta HOM05D008035 ORTHO05D009989 2.0e-09 67.8 176 33.0
FAN12G0504 Fragaria x ananassa HOM05D008035 ORTHO05D009989 5.7e-09 66.2 388 24.7
FvH4_4g36500 Fragaria vesca HOM05D008035 ORTHO05D009989 7.4e-09 65.9 388 24.7
Cc09_g07870 Coffea canephora HOM05D008035 ORTHO05D009989 9.7e-09 65.5 313 27.2
Cfa015124 Carpinus fangiana HOM05D008035 ORTHO05D009989 2.8e-08 63.9 168 32.1
TAR622G0561 Trochodendron aralioides HOM05D008035 ORTHO05D009989 3.7e-08 63.5 380 25.8
Rhsim02G0032700 Rhododendron simsii HOM05D008035 ORTHO05D009989 6.3e-08 62.8 368 25.5
TWI77G0842 Tripterygium wilfordii HOM05D008035 ORTHO05D009989 6.3e-08 62.8 352 23.6
Glyma.11G104700 Glycine max HOM05D008035 ORTHO05D009989 1.8e-07 61.2 162 29.6
Sed0009587 Sechium edule HOM05D008035 ORTHO05D009989 1.8e-07 61.2 358 25.1
COL.COLO4_27646 Corchorus olitorius HOM05D008035 ORTHO05D009989 2.4e-07 60.8 170 32.9
Duzib251G0092 Durio zibethinus HOM05D008035 ORTHO05D009989 3.1e-07 60.5 166 32.5
Gorai.005G151800 Gossypium raimondii HOM05D008035 ORTHO05D009989 3.1e-07 60.5 163 31.3
vmacro10801 Vaccinium macrocarpon HOM05D008035 ORTHO05D009989 3.1e-07 60.5 372 26.9
Gohir.D02G135800 Gossypium hirsutum HOM05D008035 ORTHO05D009989 4.1e-07 60.1 170 32.4
MD13G1008600 Malus domestica HOM05D008035 ORTHO05D009989 4.1e-07 60.1 376 24.5
FAN07G0714 Fragaria x ananassa HOM05D008035 ORTHO05D009989 5.3e-07 59.7 404 22.8
Prupe.1G344100 Prunus persica HOM05D008035 ORTHO05D009989 7.0e-07 59.3 171 33.3
QL03p043104 Quercus lobata HOM05D008035 ORTHO05D009989 7.0e-07 59.3 365 24.9
ClCG07G006990 Citrullus lanatus HOM05D008035 ORTHO05D009989 9.1e-07 58.9 366 24.0
GSVIVG01010227001 Vitis vinifera HOM05D008035 ORTHO05D009989 9.1e-07 58.9 362 26.8
Gohir.A03G111200 Gossypium hirsutum HOM05D008035 ORTHO05D009989 1.2e-06 58.5 165 30.9
Haze_01546 Corylus avellana HOM05D008035 ORTHO05D009989 2.0e-06 57.8 169 32.5
Glyma.12G029700 Glycine max HOM05D008035 ORTHO05D009989 3.5e-06 57.0 171 27.5
Cpa.g.sc953.4 Carica papaya HOM05D008035 ORTHO05D009989 4.5e-06 56.6 167 31.1
FAN22G2216 Fragaria x ananassa HOM05D008035 ORTHO05D009989 4.5e-06 56.6 382 24.3


User provided reference genes

Program Settings