Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.8e-119 432.6 213 100.0
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 3.9e-114 414.8 216 95.4
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 4.4e-110 401.4 217 93.1
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 2.7e-99 365.5 225 84.9
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 5.8e-86 321.2 220 76.4
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 1.4e-79 300.1 221 73.3
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.5e-78 296.6 192 79.2
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 2.5e-76 289.3 222 67.6
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 4.6e-75 285.0 215 68.4
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 6.1e-75 284.6 222 66.7
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 2.3e-74 282.7 220 65.5
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 2.3e-74 282.7 199 73.4
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 8.7e-74 280.8 228 64.0
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.1e-73 280.4 216 67.1
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 1.5e-73 280.0 220 66.8
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.9e-73 279.6 222 68.5
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 3.3e-73 278.9 219 66.7
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 9.7e-73 277.3 217 65.4
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.3e-72 276.9 222 63.5
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.2e-72 276.2 227 66.1
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 2.8e-72 275.8 204 68.6
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 3.7e-72 275.4 223 63.7
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 6.3e-72 274.6 223 64.1
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 1.8e-71 273.1 208 66.8
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 2.4e-71 272.7 213 66.2
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 2.4e-71 272.7 224 65.2
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 2.4e-71 272.7 220 64.5
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 2.4e-71 272.7 192 72.9
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 4.1e-71 271.9 222 66.2
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 6.9e-71 271.2 206 67.0
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 9.0e-71 270.8 209 66.5
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.5e-70 270.0 232 61.6
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 2.0e-70 269.6 171 74.9
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 2.6e-70 269.2 189 70.9
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 3.4e-70 268.9 216 63.9
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 7.7e-70 267.7 206 64.6
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 1.0e-69 267.3 192 70.8
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.0e-69 267.3 231 61.9
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 2.9e-69 265.8 233 61.8
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 2.9e-69 265.8 221 63.3
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 6.5e-69 264.6 203 65.0
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 8.5e-69 264.2 210 65.7
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 8.5e-69 264.2 198 66.7
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 8.5e-69 264.2 225 64.4
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 4.2e-68 261.9 214 66.4
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 4.2e-68 261.9 168 74.4
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 5.5e-68 261.5 226 61.1
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 5.5e-68 261.5 225 62.2
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 7.2e-68 261.2 222 58.6
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 1.6e-67 260.0 178 70.8
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 1.6e-67 260.0 192 67.7
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 2.7e-67 259.2 209 61.2
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 2.7e-67 259.2 203 62.6
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 3.6e-67 258.8 188 67.6
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 7.9e-67 257.7 212 62.3
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.4e-66 256.9 224 60.3
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 2.3e-66 256.1 166 72.3
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 3.0e-66 255.8 177 71.8
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 2.0e-65 253.1 209 63.2
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 7.4e-65 251.1 226 60.2
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 7.4e-65 251.1 222 58.1
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.3e-64 250.4 149 79.2
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 1.7e-64 250.0 216 63.4
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 2.2e-64 249.6 210 58.6
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.8e-64 248.4 161 73.9
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.8e-64 248.4 161 73.9
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.8e-63 246.5 210 60.0
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 2.4e-63 246.1 200 63.0
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 2.4e-63 246.1 209 61.7
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 2.4e-63 246.1 161 70.2
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 3.1e-63 245.7 218 60.6
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 4.1e-63 245.4 194 64.9
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.1e-63 245.4 243 55.6
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 6.9e-63 244.6 167 71.3
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 6.9e-63 244.6 174 69.0
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 9.1e-63 244.2 195 64.1
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 9.1e-63 244.2 208 59.1
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 2.0e-62 243.0 212 60.8
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.6e-62 242.7 179 67.0
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 3.4e-62 242.3 177 65.5
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 7.7e-62 241.1 223 59.2
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.7e-61 240.0 192 63.0
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 1.7e-61 240.0 174 67.8
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 1.7e-61 240.0 174 67.8
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 2.9e-61 239.2 171 66.7
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 6.5e-61 238.0 162 67.3
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 8.5e-61 237.7 168 67.3
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 5.5e-60 235.0 166 70.5
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 2.7e-59 232.6 163 68.7
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 3.6e-59 232.3 180 67.2
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 1.8e-58 229.9 210 58.6
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 2.3e-58 229.6 163 67.5
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 2.3e-58 229.6 197 63.5
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 2.0e-57 226.5 125 83.2
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 7.4e-57 224.6 187 60.4
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 2.8e-56 222.6 149 69.1
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 8.2e-56 221.1 168 62.5
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 4.1e-55 218.8 130 77.7
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.5e-54 215.3 236 51.7
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 4.5e-54 215.3 161 61.5
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.6e-51 206.8 139 76.3
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 9.7e-49 197.6 175 62.9
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 6.3e-48 194.9 201 52.7
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 4.1e-47 192.2 143 58.0
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 2.7e-46 189.5 192 49.5
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.9e-44 183.3 122 71.3
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 6.1e-43 178.3 118 66.9
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 3.0e-42 176.0 187 54.0
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.1e-39 166.0 154 59.1
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.1e-39 166.0 154 59.1
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 5.9e-38 161.8 93 86.0
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.5e-33 144.8 134 50.0
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.3e-32 144.1 93 74.2
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 4.1e-31 139.0 136 49.3
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 7.0e-31 138.3 128 48.4
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.2e-30 137.5 80 80.0
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 4.5e-30 135.6 134 56.0
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 5.6e-28 128.6 135 55.6
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.0e-26 122.5 127 49.6
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 8.3e-24 114.8 134 44.8
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 5.4e-23 112.1 127 48.8
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 2.0e-17 93.6 114 35.1
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 2.9e-08 63.2 168 28.0
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.1e-07 61.2 38 71.1


User provided reference genes

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