Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g022910 Solanum pennellii HOM05D001081 ORTHO05D004708 1.7e-66 255.8 119 100.0
Solyc03g083130.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 4.2e-25 118.2 116 59.5
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 4.2e-25 118.2 116 59.5
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 6.1e-24 114.4 116 56.9
Nitab4.5_0006933g0030 Nicotiana tabacum HOM05D001081 ORTHO05D004708 4.3e-22 108.2 115 54.8
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 1.3e-21 106.7 116 54.3
Peaxi162Scf00740g00138 Petunia axillaris HOM05D001081 ORTHO05D004708 1.3e-21 106.7 116 54.3
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 9.4e-17 90.5 116 44.8
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 1.6e-16 89.7 114 46.5
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 3.6e-16 88.6 113 46.9
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 6.1e-16 87.8 114 46.5
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 1.0e-15 87.0 115 45.2
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.3e-15 85.9 108 47.2
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 2.3e-15 85.9 83 50.6
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 2.3e-15 85.9 116 40.5
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 3.9e-15 85.1 115 43.5
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 8.8e-15 84.0 117 40.2
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 8.8e-15 84.0 107 47.7
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 1.1e-14 83.6 117 41.9
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 1.1e-14 83.6 114 43.9
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.1e-14 83.6 111 45.9
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 1.5e-14 83.2 114 43.9
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 1.5e-14 83.2 58 63.8
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 1.5e-14 83.2 114 39.5
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 3.3e-14 82.0 115 41.7
Hma1.2p1_0404F.1_g145350 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 4.3e-14 81.6 84 47.6
Medtr1g007950 Medicago truncatula HOM05D001081 ORTHO05D004708 4.3e-14 81.6 109 45.0
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 4.3e-14 81.6 111 45.0
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 5.7e-14 81.3 118 44.1
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 5.7e-14 81.3 116 38.8
Oeu041052.4 Olea europaea HOM05D001081 ORTHO05D004708 5.7e-14 81.3 115 41.7
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 5.7e-14 81.3 115 41.7
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 7.4e-14 80.9 116 38.8
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 7.4e-14 80.9 84 50.0
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 7.4e-14 80.9 115 41.7
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 9.7e-14 80.5 113 44.2
Cpa.g.sc3.89 Carica papaya HOM05D001081 ORTHO05D004708 9.7e-14 80.5 66 60.6
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 9.7e-14 80.5 112 45.5
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 1.3e-13 80.1 64 59.4
Hma1.2p1_0404F.1_g145390 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 1.3e-13 80.1 83 48.2
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 1.7e-13 79.7 117 39.3
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 2.2e-13 79.3 67 53.7
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 2.8e-13 79.0 117 41.9
Sopen03g022930 Solanum pennellii HOM05D001081 ORTHO05D004708 2.8e-13 79.0 83 56.6
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 3.7e-13 78.6 118 40.7
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 3.7e-13 78.6 109 44.0
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 4.8e-13 78.2 115 40.0
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 4.8e-13 78.2 109 44.0
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 8.2e-13 77.4 117 39.3
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 1.1e-12 77.0 118 38.1
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 1.4e-12 76.6 113 40.7
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 3.1e-12 75.5 115 40.0
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 3.1e-12 75.5 110 42.7
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 4.1e-12 75.1 114 37.7
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 4.1e-12 75.1 106 42.5
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 4.1e-12 75.1 110 41.8
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 6.9e-12 74.3 112 42.9
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 9.1e-12 73.9 111 37.8
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 9.1e-12 73.9 116 39.7
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.2e-11 73.6 115 39.1
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 2.0e-11 72.8 107 41.1
Solyc03g083190.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 2.0e-11 72.8 88 52.3
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 2.6e-11 72.4 107 42.1
Eucgr.G00092 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.6e-11 72.4 66 54.5
Eucgr.G00143 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.6e-11 72.4 66 54.5
Eucgr.H05016 Eucalyptus grandis HOM05D001081 ORTHO05D004708 2.6e-11 72.4 66 54.5
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 3.4e-11 72.0 109 39.4
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 3.4e-11 72.0 109 39.4
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 3.4e-11 72.0 107 42.1
SEGI_37251 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 3.4e-11 72.0 116 37.9
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 4.5e-11 71.6 105 38.1
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 4.5e-11 71.6 105 39.0
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 4.5e-11 71.6 105 39.0
Aqoxy4G01594 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 5.9e-11 71.2 64 50.0
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 5.9e-11 71.2 107 41.1
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 5.9e-11 71.2 107 41.1
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 5.9e-11 71.2 107 41.1
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 5.9e-11 71.2 107 41.1
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 5.9e-11 71.2 107 41.1
Eucgr.G00111 Eucalyptus grandis HOM05D001081 ORTHO05D004708 5.9e-11 71.2 59 59.3
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 5.9e-11 71.2 118 38.1
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 5.9e-11 71.2 118 38.1
Sp2g23080 Schrenkiella parvula HOM05D001081 ORTHO05D004708 5.9e-11 71.2 107 41.1
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 1.0e-10 70.5 107 40.2
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 1.0e-10 70.5 115 40.0
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 1.7e-10 69.7 118 37.3
Ca_12793_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 2.2e-10 69.3 109 40.4
Sopen03g022620 Solanum pennellii HOM05D001081 ORTHO05D004708 2.2e-10 69.3 77 55.8
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 2.9e-10 68.9 107 40.2
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 2.9e-10 68.9 110 36.4
SMO213G0001 Selaginella moellendorffii HOM05D001081 ORTHO05D004708 2.9e-10 68.9 102 38.2
Duzib205G2059 Durio zibethinus HOM05D001081 ORTHO05D004708 5.0e-10 68.2 61 52.5
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 5.0e-10 68.2 64 56.2
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 6.5e-10 67.8 116 40.5
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 8.5e-10 67.4 117 36.8
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 1.9e-09 66.2 59 54.2
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 3.2e-09 65.5 65 49.2
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 5.5e-09 64.7 114 35.1
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 5.5e-09 64.7 113 31.0
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.2e-08 63.5 106 36.8
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 3.6e-08 62.0 111 34.2
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 7.9e-08 60.8 75 45.3
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 1.0e-07 60.5 115 35.7
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 1.4e-07 60.1 103 35.0
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 5.1e-07 58.2 39 64.1
AagrBONN_evm.TU.Sc2ySwM_117.3719 Anthoceros agrestis HOM05D001081 ORTHO05D004708 3.3e-06 55.5 85 36.5


User provided reference genes

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