Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 0.0e+00 1797.7 937 100.0
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 0.0e+00 1753.4 937 98.0
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 0.0e+00 1711.4 937 95.3
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 0.0e+00 1482.6 939 83.0
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 0.0e+00 1456.8 1012 78.3
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 0.0e+00 1172.5 726 84.7
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 0.0e+00 1151.0 731 82.6
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 3.9e-299 1031.6 935 61.0
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 4.0e-296 1021.5 954 59.4
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 2.9e-278 962.2 945 57.2
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 3.2e-277 958.7 938 56.5
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 2.4e-272 942.6 971 57.1
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 2.2e-270 936.0 957 54.9
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 8.4e-270 934.1 808 62.5
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 4.9e-262 908.3 762 65.6
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 3.2e-261 905.6 877 58.3
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 2.1e-260 902.9 838 60.4
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 1.9e-258 896.3 850 58.9
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 2.5e-258 896.0 824 60.7
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 4.3e-258 895.2 938 54.7
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 5.6e-258 894.8 936 56.0
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.3e-257 893.6 794 62.0
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 2.4e-256 889.4 951 54.5
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 5.3e-256 888.3 765 63.5
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 2.0e-255 886.3 958 53.0
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 4.5e-255 885.2 941 54.4
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 7.6e-255 884.4 930 54.7
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 1.7e-254 883.2 942 54.2
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 1.2e-252 877.1 943 54.6
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 6.0e-252 874.8 932 54.6
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 7.9e-252 874.4 815 60.7
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 7.9e-252 874.4 764 62.8
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 1.8e-251 873.2 784 61.6
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 2.3e-251 872.8 795 60.6
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 5.1e-251 871.7 822 60.5
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 3.3e-250 869.0 805 61.1
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 4.3e-250 868.6 939 54.6
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 4.3e-250 868.6 805 61.0
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 5.6e-250 868.2 939 54.6
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 9.6e-250 867.5 805 61.1
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 9.6e-250 867.5 782 61.6
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.1e-249 866.3 772 62.0
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.7e-249 865.5 817 59.5
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 4.0e-248 862.1 936 53.1
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 5.3e-248 861.7 817 59.7
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 2.0e-247 859.8 842 58.0
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 2.6e-247 859.4 774 61.4
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 2.6e-247 859.4 841 57.4
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 3.4e-247 859.0 775 61.2
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 1.7e-246 856.7 683 66.6
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 2.2e-246 856.3 839 57.9
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 3.8e-246 855.5 774 61.4
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 3.8e-246 855.5 971 52.1
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 1.9e-245 853.2 847 57.0
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 2.5e-245 852.8 792 60.4
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 4.2e-245 852.0 800 59.1
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 5.5e-245 851.7 941 54.2
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.6e-244 850.1 816 58.0
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 2.1e-244 849.7 900 55.2
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 2.7e-244 849.4 835 58.2
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 3.5e-244 849.0 845 58.2
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 1.3e-243 847.0 837 58.4
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 1.8e-243 846.7 836 58.1
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 3.0e-243 845.9 819 58.6
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 6.7e-243 844.7 836 58.1
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 1.5e-242 843.6 871 55.7
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 1.5e-242 843.6 684 65.6
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 2.5e-242 842.8 836 58.0
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 5.7e-242 841.6 778 59.9
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 3.7e-241 839.0 773 61.2
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.2e-241 838.2 914 53.0
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 1.1e-240 837.4 923 53.3
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.4e-240 837.0 839 57.3
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 1.2e-239 833.9 804 58.8
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 2.6e-239 832.8 858 55.1
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.4e-239 832.4 868 54.7
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 1.2e-236 823.9 849 55.5
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 2.4e-232 809.7 865 54.0
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 2.4e-232 809.7 1069 47.9
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 9.0e-232 807.7 887 53.1
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.4e-229 800.4 767 58.1
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 7.9e-228 794.7 937 51.2
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 8.8e-227 791.2 860 53.7
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 4.8e-225 785.4 792 55.6
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 2.7e-220 769.6 717 58.3
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 1.4e-219 767.3 694 63.8
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.6e-218 763.1 802 55.4
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 3.7e-217 759.2 972 48.8
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 5.9e-215 751.9 765 54.6
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 7.7e-215 751.5 919 49.0
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 1.0e-211 741.1 620 62.6
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 2.0e-210 736.9 533 71.5
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 8.3e-201 704.9 708 56.5
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 5.2e-195 685.6 951 45.1
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 5.0e-190 669.1 735 53.3
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 3.6e-180 636.3 720 52.2
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 2.3e-171 607.1 1022 41.0
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 6.4e-169 599.0 585 58.5
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 2.1e-167 594.0 622 56.1
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 2.1e-159 567.4 646 53.4
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 7.3e-157 558.9 631 51.7
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 5.2e-155 552.7 1034 38.7
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 6.9e-147 525.8 733 44.9
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 7.9e-143 512.3 510 55.9
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.6e-135 488.0 676 44.7
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 3.8e-129 466.8 431 55.5
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 5.7e-125 453.0 554 47.1
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 4.6e-119 433.3 545 48.4
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 1.6e-90 338.6 426 49.1
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 9.2e-67 259.6 214 61.2
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 8.6e-57 226.5 168 67.9
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 6.0e-50 203.8 347 33.7
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 4.6e-42 177.6 212 51.4
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 3.9e-41 174.5 314 33.4
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 6.9e-22 110.5 279 33.3
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 1.2e-21 109.8 114 48.2
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.9e-19 102.4 74 68.9
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 7.9e-18 97.1 88 56.8
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 5.6e-16 90.9 104 49.0
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-12 79.3 249 28.1
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-11 76.3 81 55.6
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 6.0e-10 70.9 41 87.8
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 6.7e-09 67.4 38 89.5


User provided reference genes

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