Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 3.6e-282 974.2 467 100.0
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 1.4e-278 962.2 467 98.3
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 1.7e-263 912.1 467 93.1
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 3.4e-248 861.3 465 86.7
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 3.8e-223 778.1 462 78.4
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 9.4e-214 746.9 490 75.9
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 8.9e-196 687.2 471 72.6
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 4.9e-186 654.8 458 65.3
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 3.4e-179 632.1 458 62.9
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 3.4e-171 605.5 459 62.5
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 9.3e-169 597.4 455 61.3
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 8.7e-167 590.9 463 59.4
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 5.8e-163 578.2 457 58.9
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 7.1e-161 571.2 461 58.1
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 1.7e-159 566.6 458 58.3
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 8.7e-159 564.3 470 57.2
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 4.8e-157 558.5 460 59.1
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 1.4e-156 557.0 460 58.9
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 5.3e-156 555.1 406 63.1
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 1.2e-155 553.9 462 58.0
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.3e-151 540.4 461 56.0
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 2.1e-149 533.1 457 54.5
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.4e-148 530.4 458 53.9
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 2.4e-148 529.6 458 54.1
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 6.9e-148 528.1 458 54.6
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 1.5e-147 526.9 458 53.9
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 3.4e-147 525.8 461 53.8
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 4.9e-146 521.9 460 53.3
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 8.4e-146 521.2 460 53.3
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 1.6e-144 516.9 539 48.2
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.3e-143 513.8 458 54.1
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 1.8e-140 503.4 422 52.4
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 3.1e-140 502.7 461 51.0
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 4.1e-140 502.3 458 50.2
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 5.3e-140 501.9 417 58.3
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 1.3e-135 487.3 508 47.6
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 6.7e-135 485.0 459 49.9
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 5.7e-134 481.9 462 50.2
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 9.7e-134 481.1 458 50.2
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 1.8e-132 476.9 439 50.6
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 5.3e-132 475.3 459 49.7
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 6.9e-132 474.9 484 50.4
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 1.4e-129 467.2 459 49.2
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 1.0e-127 461.1 456 47.6
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 1.8e-127 460.3 458 47.6
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 2.3e-127 459.9 459 47.5
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 3.9e-127 459.1 453 50.6
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 1.4e-124 450.7 462 48.1
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.2e-123 447.6 458 49.6
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 4.5e-123 445.7 438 49.1
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 4.2e-121 439.1 448 47.5
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 1.0e-119 434.5 470 46.0
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 5.0e-114 415.6 387 50.9
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 1.1e-113 414.5 466 46.1
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 3.2e-113 412.9 466 45.3
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 3.3e-110 402.9 380 52.9
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 1.2e-107 394.4 458 44.3
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 1.2e-107 394.4 467 43.7
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 2.6e-107 393.3 438 45.9
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 5.0e-106 389.0 438 45.7
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 6.5e-106 388.7 532 42.1
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 3.6e-104 382.9 435 42.5
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 4.7e-104 382.5 469 42.2
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 4.7e-104 382.5 469 42.2
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 4.7e-104 382.5 435 42.5
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 6.1e-104 382.1 435 42.5
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 1.0e-103 381.3 455 41.8
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.8e-103 380.6 469 42.2
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.2e-102 377.9 412 46.8
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.5e-102 377.5 470 41.9
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 1.5e-102 377.5 471 42.5
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 4.4e-102 375.9 467 42.2
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 6.3e-101 372.1 460 41.1
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.4e-100 370.9 460 40.9
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 4.5e-99 365.9 359 47.1
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.0e-98 364.8 460 40.7
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.0e-98 364.8 496 40.1
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 2.2e-98 363.6 459 43.4
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 2.2e-98 363.6 444 43.0
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.1e-97 361.3 504 38.9
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 1.9e-97 360.5 384 48.4
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 2.1e-96 357.1 463 40.8
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 8.8e-95 351.7 475 39.6
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 7.5e-94 348.6 440 41.1
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.1e-92 344.7 466 41.8
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 1.2e-91 341.3 453 42.2
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 1.2e-88 331.3 453 41.3
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 3.6e-88 329.7 457 38.3
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 4.7e-88 329.3 454 39.2
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 1.4e-87 327.8 261 57.9
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 5.2e-87 325.9 443 41.3
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 8.9e-87 325.1 455 41.1
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 1.7e-85 320.9 462 39.0
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 1.8e-84 317.4 464 39.7
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 9.2e-84 315.1 470 38.1
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 9.2e-84 315.1 470 38.1
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 1.6e-83 314.3 464 39.2
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 2.0e-83 313.9 464 38.8
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 4.6e-83 312.8 467 39.0
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 5.9e-83 312.4 464 38.6
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 1.0e-82 311.6 456 37.3
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 1.7e-82 310.8 464 39.0
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 2.3e-82 310.5 462 39.4
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 5.0e-82 309.3 461 38.2
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 8.6e-82 308.5 476 38.0
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 2.5e-81 307.0 462 38.3
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 5.6e-81 305.8 478 37.9
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 5.6e-81 305.8 463 38.0
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 2.8e-80 303.5 476 37.0
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 8.0e-80 302.0 430 38.6
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.0e-79 301.6 461 36.9
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 5.2e-79 299.3 473 37.6
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 8.9e-79 298.5 471 37.4
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 7.5e-78 295.4 462 38.1
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 9.8e-78 295.0 478 38.7
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 4.1e-76 289.7 376 42.0
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 3.5e-75 286.6 305 47.5
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 3.3e-73 280.0 333 42.9
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 7.3e-73 278.9 307 46.9
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 3.6e-72 276.6 255 52.2
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.4e-71 274.6 372 40.9
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 2.2e-69 267.3 437 36.6
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 2.9e-69 266.9 314 43.0
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 8.3e-69 265.4 465 36.1
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 4.1e-68 263.1 460 37.0
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 4.1e-68 263.1 460 37.0
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 2.7e-67 260.4 459 37.3
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 3.5e-67 260.0 254 48.4
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 4.6e-67 259.6 460 36.3
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 4.6e-67 259.6 496 32.5
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 1.7e-66 257.7 487 33.7
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 2.3e-66 257.3 464 35.3
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 3.9e-66 256.5 459 37.0
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 7.3e-65 252.3 495 32.5
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 8.1e-64 248.8 260 48.1
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 1.8e-63 247.7 424 33.7
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 5.2e-63 246.1 489 33.3
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 2.9e-61 240.4 301 43.5
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 8.4e-61 238.8 441 36.1
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 3.6e-56 223.4 507 33.1
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 3.1e-55 220.3 294 39.1
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 1.2e-51 208.4 270 37.8
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 7.3e-49 199.1 361 33.8
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 2.2e-45 187.6 203 47.3
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 1.2e-43 181.8 176 49.4
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 7.9e-43 179.1 135 59.3
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 2.8e-40 170.6 293 37.2
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 4.8e-40 169.9 329 34.7
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 6.9e-39 166.0 148 52.0
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.2e-30 138.7 177 42.9
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 2.5e-28 131.0 436 26.8
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.2e-27 128.6 195 36.4
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 4.1e-23 113.6 86 61.6
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 7.2e-20 102.8 296 26.4
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 2.8e-16 90.9 117 40.2
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 2.4e-15 87.8 133 35.3
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 3.4e-14 84.0 107 43.9
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 2.2e-13 81.3 142 32.4
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 2.5e-12 77.8 62 54.8
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 3.2e-12 77.4 83 38.6
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 2.1e-11 74.7 55 61.8
Lj1g0024684 Lotus japonicus HOM05D004162 ORTHO05D004543 7.9e-11 72.8 60 58.3
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 1.2e-06 58.9 86 34.9
SHI19079 Sapria himalayana HOM05D004162 ORTHO05D004543 1.5e-06 58.5 62 40.3


User provided reference genes

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