Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 1.1e-167 593.2 301 100.0
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 6.2e-166 587.4 301 98.7
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 2.4e-162 575.5 301 96.0
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 3.9e-160 568.2 301 95.0
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 1.8e-157 559.3 301 93.7
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.2e-148 530.0 302 91.1
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 1.1e-143 513.5 300 83.7
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 5.6e-143 511.1 301 84.1
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 9.6e-143 510.4 301 83.4
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 9.6e-143 510.4 300 83.0
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 1.3e-142 510.0 301 84.1
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 1.6e-142 509.6 301 82.7
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 3.6e-142 508.4 301 82.4
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 1.4e-141 506.5 261 98.5
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 4.0e-141 505.0 300 81.7
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 5.3e-141 504.6 300 82.0
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 5.3e-141 504.6 300 80.7
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 6.9e-141 504.2 300 81.7
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 9.0e-141 503.8 301 82.1
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 1.2e-140 503.4 300 82.0
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 2.6e-140 502.3 317 78.9
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 4.5e-140 501.5 301 81.1
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 5.8e-140 501.1 301 80.7
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 7.6e-140 500.7 301 81.1
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 7.6e-140 500.7 300 81.3
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 7.6e-140 500.7 300 80.3
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 1.3e-139 500.0 301 80.7
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 1.7e-139 499.6 299 82.3
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.2e-139 499.2 301 80.4
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 2.2e-139 499.2 300 81.7
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.9e-139 498.8 301 80.7
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 3.8e-139 498.4 300 82.7
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 8.4e-139 497.3 301 80.4
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 1.1e-138 496.9 299 80.6
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 2.4e-138 495.7 300 82.0
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 2.4e-138 495.7 300 80.7
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 7.1e-138 494.2 300 81.3
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 7.1e-138 494.2 300 80.0
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 7.1e-138 494.2 300 80.7
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 1.6e-137 493.0 300 82.0
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 1.6e-137 493.0 300 79.7
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 1.6e-137 493.0 300 80.0
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 2.7e-137 492.3 300 79.3
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 4.6e-137 491.5 300 80.3
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 6.0e-137 491.1 300 79.3
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 7.9e-137 490.7 300 79.7
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 7.9e-137 490.7 300 79.3
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 7.9e-137 490.7 301 79.7
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 1.3e-136 490.0 300 79.0
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 1.3e-136 490.0 301 80.7
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 2.3e-136 489.2 300 79.3
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 3.9e-136 488.4 300 79.0
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 6.7e-136 487.6 300 78.7
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 8.7e-136 487.3 300 79.0
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 8.7e-136 487.3 300 79.3
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 8.7e-136 487.3 299 78.9
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 1.1e-135 486.9 302 79.1
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.1e-135 486.9 299 78.9
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 1.9e-135 486.1 303 78.5
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 1.9e-135 486.1 300 78.3
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 2.5e-135 485.7 300 79.3
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 4.3e-135 485.0 303 78.5
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 4.3e-135 485.0 303 78.5
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 4.3e-135 485.0 302 78.5
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 4.3e-135 485.0 300 78.7
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 7.4e-135 484.2 302 78.1
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 7.4e-135 484.2 300 78.7
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 9.6e-135 483.8 299 78.9
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 1.3e-134 483.4 302 77.5
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 1.3e-134 483.4 300 79.0
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.6e-134 483.0 297 78.8
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 1.6e-134 483.0 300 78.3
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 1.6e-134 483.0 302 78.1
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 2.1e-134 482.6 302 78.1
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 2.1e-134 482.6 303 77.6
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 2.1e-134 482.6 300 78.0
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 2.8e-134 482.3 300 77.3
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 2.8e-134 482.3 302 77.5
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 2.8e-134 482.3 303 78.2
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 2.8e-134 482.3 300 77.7
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 2.8e-134 482.3 300 79.3
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 4.8e-134 481.5 304 78.3
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 6.2e-134 481.1 300 78.0
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 6.2e-134 481.1 300 77.7
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 8.1e-134 480.7 302 77.5
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 1.1e-133 480.3 300 78.0
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 1.4e-133 479.9 300 78.7
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 1.8e-133 479.6 300 77.7
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 4.0e-133 478.4 300 77.7
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 5.3e-133 478.0 301 77.4
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 5.8e-132 474.6 302 77.2
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 1.3e-131 473.4 299 77.3
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 1.7e-131 473.0 300 76.7
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 2.9e-131 472.2 300 76.7
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 4.9e-131 471.5 317 73.8
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 6.4e-131 471.1 300 76.3
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 8.4e-131 470.7 301 76.4
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 1.4e-130 469.9 301 76.7
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 2.4e-130 469.2 299 76.9
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 5.5e-130 468.0 302 76.2
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 7.1e-130 467.6 300 76.3
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 2.7e-129 465.7 301 75.7
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 1.0e-128 463.8 304 74.3
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 1.3e-128 463.4 320 73.1
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 1.8e-128 463.0 335 71.0
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 3.0e-128 462.2 304 74.0
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 1.9e-127 459.5 302 73.5
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 72.7
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 2.5e-127 459.1 300 75.0
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 3.3e-127 458.8 304 74.3
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 2.8e-126 455.7 340 68.5
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 3.1e-125 452.2 299 73.2
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 5.3e-125 451.4 306 72.9
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 1.5e-124 449.9 298 74.2
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 2.2e-118 429.5 289 70.9
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 3.4e-116 422.2 289 70.2
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 4.5e-116 421.8 241 83.8
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 5.0e-115 418.3 249 80.3
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 8.5e-115 417.5 309 70.9
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 4.2e-114 415.2 300 70.7
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 4.2e-114 415.2 287 69.7
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 5.5e-114 414.8 299 65.6
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 1.2e-113 413.7 340 62.9
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 2.5e-111 406.0 300 67.7
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 2.1e-105 386.3 300 65.7
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 4.8e-102 375.2 299 61.9
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 3.8e-99 365.5 508 44.1
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 2.7e-97 359.4 301 63.5
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 8.8e-96 354.4 209 79.9
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 6.3e-94 348.2 209 78.9
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 8.2e-94 347.8 297 58.6
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 2.4e-93 346.3 290 57.6
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 3.5e-92 342.4 219 76.3
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 1.5e-90 337.0 199 81.9
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 8.5e-83 311.2 243 67.1
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 1.0e-75 287.7 296 50.3
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 2.3e-75 286.6 242 63.6
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 4.7e-73 278.9 246 55.7
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 3.6e-65 252.7 154 80.5
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 2.1e-52 210.3 285 41.1
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 1.9e-50 203.8 300 39.0
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 2.1e-44 183.7 160 56.2
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 6.0e-44 182.2 196 51.5
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 4.3e-42 176.0 101 82.2
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 3.8e-38 162.9 196 48.0
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.8e-33 146.7 84 82.1
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 4.4e-31 139.4 84 77.4
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 6.2e-25 119.0 237 30.0
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 2.6e-23 113.6 82 68.3
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 4.9e-22 109.4 147 40.1
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 1.2e-20 104.8 87 62.1
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 3.5e-20 103.2 70 72.9
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 3.0e-19 100.1 63 74.6
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.1e-18 98.2 161 38.5
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 2.8e-17 93.6 86 57.0
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 6.4e-14 82.4 121 41.3
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 5.6e-10 69.3 53 66.0
Lj9A668T37 Lonicera japonica HOM05D004556 ORTHO05D005298 3.4e-07 60.1 36 77.8
Sp1g08890 Schrenkiella parvula HOM05D000111 ORTHO05D013786 2.9e-06 57.0 63 54.0


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