Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 4.2e-40 167.5 83 100.0
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 1.5e-37 159.1 83 92.8
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 2.2e-36 155.2 83 89.2
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 4.1e-35 151.0 83 86.7
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 3.4e-34 147.9 83 86.7
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 6.7e-30 133.7 72 86.1
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 3.7e-28 127.9 72 83.3
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 1.6e-26 122.5 65 89.2
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 5.9e-26 120.6 66 86.4
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 5.9e-26 120.6 70 81.4
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 1.3e-25 119.4 65 87.7
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 1.3e-25 119.4 77 75.3
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.7e-25 119.0 66 84.8
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 1.7e-25 119.0 66 83.3
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 2.9e-25 118.2 68 82.4
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 3.8e-25 117.9 66 84.8
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 5.0e-25 117.5 68 80.9
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 5.0e-25 117.5 68 80.9
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 5.0e-25 117.5 68 80.9
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 5.0e-25 117.5 68 80.9
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.0e-25 117.5 66 83.3
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 6.5e-25 117.1 65 86.2
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 8.5e-25 116.7 65 84.6
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.1e-24 116.3 64 84.4
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 1.5e-24 115.9 72 79.2
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.9e-24 115.5 74 74.3
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 5.5e-24 114.0 78 73.1
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 7.2e-24 113.6 74 73.0
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 7.2e-24 113.6 68 79.4
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 7.2e-24 113.6 76 73.7
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 7.2e-24 113.6 65 83.1
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 9.4e-24 113.2 61 90.2
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 9.4e-24 113.2 61 90.2
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 9.4e-24 113.2 69 79.7
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.2e-23 112.8 61 88.5
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.2e-23 112.8 70 78.6
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.2e-23 112.8 69 78.3
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 1.6e-23 112.5 66 80.3
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.6e-23 112.5 69 76.8
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 2.1e-23 112.1 68 79.4
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 2.1e-23 112.1 68 82.4
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 2.1e-23 112.1 72 77.8
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 2.7e-23 111.7 69 78.3
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 2.7e-23 111.7 73 74.0
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 3.6e-23 111.3 65 84.6
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 8.0e-23 110.2 65 81.5
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 1.0e-22 109.8 62 83.9
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 1.0e-22 109.8 78 73.1
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.4e-22 109.4 69 78.3
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 1.8e-22 109.0 69 78.3
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 1.8e-22 109.0 61 80.3
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 3.0e-22 108.2 58 87.9
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 5.2e-22 107.5 65 75.4
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 5.2e-22 107.5 68 77.9
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 6.7e-22 107.1 67 80.6
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 6.7e-22 107.1 67 77.6
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.5e-21 105.9 64 79.7
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 1.5e-21 105.9 56 91.1
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 2.6e-21 105.1 78 69.2
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.6e-21 105.1 69 73.9
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 3.3e-21 104.8 66 75.8
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 5.7e-21 104.0 54 90.7
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 7.5e-21 103.6 56 87.5
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 9.7e-21 103.2 55 87.3
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 1.7e-20 102.4 75 68.0
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 1.7e-20 102.4 75 68.0
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.7e-20 102.4 62 79.0
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 2.2e-20 102.1 78 65.4
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 2.2e-20 102.1 75 68.0
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 2.2e-20 102.1 75 68.0
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 2.2e-20 102.1 64 78.1
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 2.2e-20 102.1 70 68.6
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 2.8e-20 101.7 52 92.3
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 2.8e-20 101.7 62 80.6
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-20 101.7 78 65.4
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-20 101.7 62 80.6
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 2.8e-20 101.7 62 80.6
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 2.8e-20 101.7 105 54.3
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 3.7e-20 101.3 62 77.4
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 3.7e-20 101.3 60 81.7
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 4.8e-20 100.9 64 76.6
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 4.8e-20 100.9 75 69.3
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 6.3e-20 100.5 72 70.8
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 6.3e-20 100.5 52 90.4
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 6.3e-20 100.5 60 81.7
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 8.2e-20 100.1 54 87.0
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 8.2e-20 100.1 53 88.7
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.8e-19 99.0 54 87.0
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 1.8e-19 99.0 55 85.5
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.8e-19 99.0 70 67.1
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 4.1e-19 97.8 58 82.8
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 5.3e-19 97.4 96 57.3
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.2e-18 96.3 61 75.4
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.0e-17 93.2 64 75.0
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 3.8e-17 91.3 79 59.5
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 7.2e-16 87.0 44 93.2
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 7.2e-16 87.0 63 61.9
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 1.2e-15 86.3 44 90.9
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 1.6e-15 85.9 67 59.7
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 2.1e-15 85.5 63 68.3
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 3.6e-15 84.7 49 83.7
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 3.6e-15 84.7 44 90.9
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.8e-14 82.4 44 88.6
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 2.3e-14 82.0 42 92.9
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 8.8e-14 80.1 50 76.0
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 1.5e-13 79.3 44 81.8
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 6.3e-12 73.9 49 75.5
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.8e-11 72.4 49 73.5
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 5.4e-11 70.9 37 89.2
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 3.5e-10 68.2 61 60.7
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.9e-09 65.1 43 72.1
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 2.5e-08 62.0 69 52.2
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.2e-07 59.7 32 84.4
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.2e-07 59.7 32 84.4
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 4.7e-07 57.8 28 89.3
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 1.8e-06 55.8 68 51.5
Ah.02g131100 Amaranthus hybridus HOM05D006885 ORTHO05D008606 8.8e-06 53.5 34 73.5


User provided reference genes

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