Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g049140.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.3e-52 209.9 134 100.0
Solyc12g049070.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.2e-41 172.9 133 85.7
Solyc12g049170.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 4.1e-41 172.6 133 88.0
Sopen12g023590 Solanum pennellii HOM05D008172 ORTHO05D007977 5.4e-41 172.2 133 89.5
Sopen12g023460 Solanum pennellii HOM05D008172 ORTHO05D007977 1.6e-40 170.6 133 87.2
Sopen12g023640 Solanum pennellii HOM05D008172 ORTHO05D007977 3.5e-40 169.5 132 86.4
Sopen12g023610 Solanum pennellii HOM05D008172 ORTHO05D007977 1.7e-39 167.2 133 85.0
Solyc12g049040.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-38 164.5 132 84.8
Solyc12g049160.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.3e-38 162.9 133 83.5
PGSC0003DMG400011615 Solanum tuberosum HOM05D008172 ORTHO05D007977 7.3e-38 161.8 129 86.0
Sopen12g023620 Solanum pennellii HOM05D008172 ORTHO05D007977 2.1e-37 160.2 129 84.5
Solyc12g049050.2 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.1e-36 157.9 132 83.3
PGSC0003DMG400011614 Solanum tuberosum HOM05D008172 ORTHO05D007977 9.8e-35 151.4 133 82.0
Sopen12g023470 Solanum pennellii HOM05D008172 ORTHO05D007977 1.3e-34 151.0 132 75.8
PGSC0003DMG400011599 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-31 141.4 129 79.1
Solyc12g049150.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.3e-31 141.0 133 78.2
Sopen12g023600 Solanum pennellii HOM05D008172 ORTHO05D007977 1.7e-31 140.6 132 77.3
PGSC0003DMG400023862 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.7e-31 140.6 93 78.5
Solyc12g100090.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.1e-29 133.7 93 75.3
Solyc12g049090.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.8e-29 133.3 133 67.7
Sopen12g023630 Solanum pennellii HOM05D008172 ORTHO05D007977 8.1e-29 131.7 93 74.2
Sopen12g034730 Solanum pennellii HOM05D008172 ORTHO05D007977 5.2e-28 129.0 93 75.3
PGSC0003DMG400023861 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.5e-27 127.5 83 80.7
Solyc12g049180.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 2.2e-26 123.6 92 69.6
Sopen12g023450 Solanum pennellii HOM05D008172 ORTHO05D007977 1.2e-24 117.9 133 61.7
PGSC0003DMG400023859 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.1e-24 117.1 91 71.4
Sopen12g034700 Solanum pennellii HOM05D008172 ORTHO05D007977 2.5e-22 110.2 93 67.7
Sopen12g034710 Solanum pennellii HOM05D008172 ORTHO05D007977 7.3e-22 108.6 80 75.0
Sopen12g034720 Solanum pennellii HOM05D008172 ORTHO05D007977 9.6e-22 108.2 88 71.6
Solyc12g038240.3 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.2e-21 107.8 94 62.8
Solyc12g038170.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.5e-19 100.9 89 62.9
PGSC0003DMG400023858 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.5e-19 100.9 88 67.0
Sopen12g023480 Solanum pennellii HOM05D008172 ORTHO05D007977 2.2e-18 97.1 107 71.0
PGSC0003DMG400006488 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.9e-18 96.7 93 58.1
PGSC0003DMG400011600 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.9e-18 95.9 87 63.2
PGSC0003DMG400023857 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.4e-17 93.6 84 61.9
Solyc12g100100.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 1.2e-16 91.3 73 68.5
PGSC0003DMG400006490 Solanum tuberosum HOM05D008172 ORTHO05D007977 2.7e-16 90.1 70 68.6
PGSC0003DMG400023855 Solanum tuberosum HOM05D008172 ORTHO05D007977 1.0e-15 88.2 114 50.9
Solyc12g100080.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 5.1e-15 85.9 93 57.0
Solyc12g100110.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 6.6e-15 85.5 93 55.9
Sopen12g034740 Solanum pennellii HOM05D008172 ORTHO05D007977 6.6e-15 85.5 93 57.0
Sopen12g022960 Solanum pennellii HOM05D008172 ORTHO05D007977 1.4e-12 77.8 66 63.6
Solyc12g044710.1 Solanum lycopersicum HOM05D008172 ORTHO05D007977 3.1e-12 76.6 94 50.0
PGSC0003DMG400023856 Solanum tuberosum HOM05D008172 ORTHO05D007977 4.0e-12 76.3 54 72.2
Sopen12g022950 Solanum pennellii HOM05D008172 ORTHO05D007977 6.9e-12 75.5 64 65.6
Sopen12g018240 Solanum pennellii HOM05D008172 ORTHO05D007977 1.2e-11 74.7 88 52.3
Sopen12g022940 Solanum pennellii HOM05D008172 ORTHO05D007977 1.5e-11 74.3 74 62.2
CAN.G575.61 Capsicum annuum HOM05D008172 ORTHO05D007977 1.1e-09 68.2 70 58.6
Peaxi162Scf00062g01212 Petunia axillaris HOM05D008172 ORTHO05D007977 1.1e-09 68.2 57 63.2
Peaxi162Scf00062g01216 Petunia axillaris HOM05D008172 ORTHO05D007977 1.1e-09 68.2 57 63.2
Nitab4.5_0000508g0080 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.4e-09 67.0 61 57.4
Sopen12g017900 Solanum pennellii HOM05D000002 ORTHO05D007977 7.1e-09 65.5 55 61.8
Nitab4.5_0007819g0020 Nicotiana tabacum HOM05D008172 ORTHO05D007977 2.7e-08 63.5 61 57.4
Sopen12g017410 Solanum pennellii HOM05D008172 ORTHO05D007977 4.6e-08 62.8 54 63.0
PGSC0003DMG400006489 Solanum tuberosum HOM05D008172 ORTHO05D007977 6.0e-08 62.4 68 52.9
Nitab4.5_0008647g0050 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.0e-07 61.6 99 44.4
Peaxi162Scf00062g01218 Petunia axillaris HOM05D008172 ORTHO05D007977 1.1e-06 58.2 55 54.5
Nitab4.5_0001925g0120 Nicotiana tabacum HOM05D008172 ORTHO05D007977 1.9e-06 57.4 45 64.4
CAN.G575.57 Capsicum annuum HOM05D008172 ORTHO05D007977 5.6e-06 55.8 43 69.8
Nitab4.5_0006164g0050 Nicotiana tabacum HOM05D008172 ORTHO05D283931 7.3e-06 55.5 53 54.7
Peaxi162Scf00062g00114 Petunia axillaris HOM05D008172 ORTHO05D007977 7.3e-06 55.5 77 45.5


User provided reference genes

Program Settings