Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g043070.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 3.6e-205 718.0 358 100.0
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 8.6e-183 643.7 334 97.0
Solyc07g064540.3 Solanum lycopersicum HOM05D004933 ORTHO05D005465 7.3e-174 614.0 334 94.0
Nitab4.5_0006356g0020 Nicotiana tabacum HOM05D004933 ORTHO05D005465 3.8e-162 575.1 347 83.3
Nitab4.5_0000171g0280 Nicotiana tabacum HOM05D004933 ORTHO05D005465 2.8e-157 558.9 347 81.3
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 3.9e-151 538.5 337 79.8
Sopen03g025600 Solanum pennellii HOM05D004933 ORTHO05D005465 1.5e-147 526.6 300 89.7
Hma1.2p1_1805F.1_g303150 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 1.5e-102 377.1 343 55.1
Hma1.2p1_0264F.1_g105950 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 2.0e-102 376.7 341 55.4
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 5.7e-102 375.2 353 55.5
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 1.1e-100 370.9 355 53.2
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 1.4e-100 370.5 355 53.5
Oeu064001.1 Olea europaea HOM05D004933 ORTHO05D005465 4.1e-100 369.0 339 56.0
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 1.6e-99 367.1 339 54.3
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 7.7e-99 364.8 339 54.0
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 6.1e-96 355.1 356 52.8
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 2.3e-95 353.2 339 55.2
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 2.6e-94 349.7 340 52.6
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 3.4e-94 349.4 344 52.0
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 5.7e-94 348.6 341 54.0
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 9.8e-94 347.8 347 51.9
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 1.7e-93 347.1 355 53.5
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 1.7e-93 347.1 338 54.4
QL08p065080 Quercus lobata HOM05D004933 ORTHO05D005465 4.9e-93 345.5 339 51.0
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 6.3e-93 345.1 339 51.6
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 6.3e-93 345.1 339 51.3
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 1.4e-92 344.0 347 51.6
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 1.4e-92 344.0 344 50.9
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.8e-92 343.6 338 52.4
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 2.4e-92 343.2 338 52.4
COL.COLO4_19474 Corchorus olitorius HOM05D004933 ORTHO05D005465 7.0e-92 341.7 343 52.5
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 9.2e-92 341.3 343 51.9
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.2e-91 340.9 338 52.1
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 1.6e-91 340.5 342 51.2
VMungo0647G1932 Vigna mungo HOM05D004933 ORTHO05D005465 3.5e-91 339.3 342 51.2
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 1.3e-90 337.4 342 51.5
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 1.7e-90 337.0 342 51.2
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 1.7e-90 337.0 341 51.9
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 2.9e-90 336.3 338 50.3
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 1.5e-89 334.0 353 51.6
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 1.5e-89 334.0 345 51.6
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 1.9e-89 333.6 346 51.4
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 2.5e-89 333.2 357 48.5
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 4.3e-89 332.4 342 48.2
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 2.3e-87 326.6 342 52.6
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 4.0e-87 325.9 340 51.2
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 5.2e-87 325.5 341 51.3
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 6.8e-87 325.1 344 47.4
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 3.4e-86 322.8 348 51.1
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 5.8e-86 322.0 345 50.7
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 3.7e-85 319.3 343 49.3
FAN03G3286 Fragaria x ananassa HOM05D004933 ORTHO05D005465 8.3e-85 318.2 350 49.4
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 8.3e-85 318.2 338 50.0
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 1.4e-84 317.4 344 50.0
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 1.4e-84 317.4 340 50.0
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 9.2e-84 314.7 339 52.2
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 1.2e-83 314.3 338 49.4
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 4.6e-83 312.4 344 49.7
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 6.0e-83 312.0 356 48.3
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.0e-82 311.2 350 49.1
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 3.0e-82 309.7 350 49.1
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 8.6e-82 308.1 350 49.4
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 1.9e-81 307.0 338 48.5
Sopen03g025610 Solanum pennellii HOM05D004933 ORTHO05D005465 7.3e-81 305.1 156 96.2
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 6.2e-80 302.0 339 48.7
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 8.9e-79 298.1 349 50.1
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 1.2e-78 297.7 317 49.8
Sopen10g016820 Solanum pennellii HOM05D004933 ORTHO05D005465 2.6e-78 296.6 157 95.5
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 2.6e-78 296.6 340 47.9
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 5.8e-78 295.4 341 48.4
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 2.4e-76 290.0 345 48.4
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 8.1e-72 275.0 335 43.9
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 2.3e-71 273.5 343 44.6
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 3.1e-71 273.1 342 44.7
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 3.1e-71 273.1 341 44.9
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 6.8e-71 271.9 338 43.2
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 8.9e-71 271.6 343 44.9
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 2.6e-70 270.0 338 45.6
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 3.4e-70 269.6 340 45.0
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 2.9e-69 266.5 340 44.1
AL4G34440 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 3.7e-69 266.2 340 44.4
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 6.4e-69 265.4 340 45.6
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 2.7e-67 260.0 326 45.7
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 2.4e-63 246.9 343 44.0
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 8.9e-63 245.0 214 58.9
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 3.4e-62 243.0 343 43.7
BcaC02g12882 Brassica carinata HOM05D004933 ORTHO05D005465 4.4e-62 242.7 343 43.7
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 4.4e-62 242.7 340 44.1
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 9.9e-62 241.5 340 43.8
Solyc09g042480.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 6.4e-61 238.8 192 69.3
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 8.4e-61 238.4 368 40.8
FAN18G3827 Fragaria x ananassa HOM05D004933 ORTHO05D005465 2.1e-59 233.8 353 40.5
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 1.7e-58 230.7 365 42.7
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 1.9e-57 227.3 365 42.2
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 1.1e-55 221.5 295 44.7
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 6.6e-50 202.2 289 45.0
CDE04G3054 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 1.6e-40 171.0 279 40.1
PSO063G4276 Papaver somniferum HOM05D004933 ORTHO05D005465 1.9e-28 131.0 144 49.3
Pp3c18_13500 Physcomitrium patens HOM05D004933 ORTHO05D005465 2.2e-21 107.5 250 32.4
LjContig00408g0027695 Lotus japonicus HOM05D004933 ORTHO05D005465 2.5e-20 104.0 91 51.6
Actinidia31635 Actinidia chinensis HOM05D004933 ORTHO05D005465 3.6e-19 100.1 71 63.4
Prupe.2G265500 Prunus persica HOM05D004933 ORTHO05D005465 1.4e-15 88.2 75 53.3
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis HOM05D004933 ORTHO05D005465 1.8e-15 87.8 239 31.8
CDE04G2226 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 6.1e-11 72.8 65 46.2
SMO361G0687 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 4.4e-09 66.6 132 31.1
Dinv21857 Davidia involucrata HOM05D004933 ORTHO05D005465 4.1e-07 60.1 63 46.0


User provided reference genes

Program Settings