Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g073140.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 1.1e-50 203.0 97 100.0
Sopen11g030790 Solanum pennellii HOM05D000699 ORTHO05D000519 1.3e-45 186.0 91 95.6
Sopen04g030430 Solanum pennellii HOM05D000699 ORTHO05D000519 2.3e-45 185.3 89 97.8
Peaxi162Scf00152g00132 Petunia axillaris HOM05D000699 ORTHO05D000519 2.1e-35 152.1 96 80.2
Nitab4.5_0000292g0090 Nicotiana tabacum HOM05D000699 ORTHO05D000519 9.0e-34 146.7 68 92.6
Nitab4.5_0000436g0100 Nicotiana tabacum HOM05D000699 ORTHO05D000519 1.5e-33 146.0 88 81.8
PGSC0003DMG400025774 Solanum tuberosum HOM05D000699 ORTHO05D000519 4.2e-31 137.9 69 88.4
CAN.G1231.16 Capsicum annuum HOM05D000699 ORTHO05D000519 2.1e-30 135.6 80 77.5
Sopen01g049890 Solanum pennellii HOM05D000699 ORTHO05D000519 7.9e-30 133.7 69 85.5
Peaxi162Scf00152g00239 Petunia axillaris HOM05D000699 ORTHO05D000519 1.0e-29 133.3 78 75.6
PGSC0003DMG400021585 Solanum tuberosum HOM05D000699 ORTHO05D000519 1.3e-29 132.9 73 79.5
Solyc01g107710.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 2.3e-29 132.1 65 80.0
CAN.G1231.15 Capsicum annuum HOM05D000699 ORTHO05D000519 3.3e-28 128.3 80 77.5
PGSC0003DMG400025775 Solanum tuberosum HOM05D000699 ORTHO05D000519 9.6e-28 126.7 80 76.2
Solyc01g107720.3 Solanum lycopersicum HOM05D000699 ORTHO05D000519 3.1e-26 121.7 92 68.5
Sopen01g049900 Solanum pennellii HOM05D000699 ORTHO05D000519 4.0e-26 121.3 81 70.4
Peaxi162Scf00016g02253 Petunia axillaris HOM05D000699 ORTHO05D000519 4.5e-25 117.9 106 58.5
Solyc06g034130.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 7.1e-23 110.5 74 70.3
Nitab4.5_0002815g0110 Nicotiana tabacum HOM05D000699 ORTHO05D000519 5.1e-21 104.4 55 80.0
Sopen06g010790 Solanum pennellii HOM05D000699 ORTHO05D000519 1.9e-20 102.4 64 68.8
Nitab4.5_0005392g0070 Nicotiana tabacum HOM05D000699 ORTHO05D000519 2.5e-20 102.1 55 78.2
Nitab4.5_0009329g0010 Nicotiana tabacum HOM05D000699 ORTHO05D000519 2.5e-20 102.1 55 78.2
arahy.Tifrunner.gnm1.ann1.9BC1I1 Arachis hypogaea HOM05D000699 ORTHO05D000519 6.2e-19 97.4 86 58.1
arahy.Tifrunner.gnm1.ann1.AR92CS Arachis hypogaea HOM05D000699 ORTHO05D000519 1.1e-18 96.7 91 58.2
HanXRQChr10g0291481 Helianthus annuus HOM05D000699 ORTHO05D000519 1.8e-18 95.9 77 58.4
CsaV3_7G008300 Cucumis sativus L. HOM05D000699 ORTHO05D000519 3.1e-18 95.1 72 58.3
ClCG02G006230 Citrullus lanatus HOM05D000699 ORTHO05D000519 1.5e-17 92.8 75 56.0
HanXRQChr16g0509871 Helianthus annuus HOM05D000699 ORTHO05D000519 2.0e-17 92.4 81 55.6
HanXRQChr16g0509881 Helianthus annuus HOM05D000699 ORTHO05D000519 2.0e-17 92.4 73 60.3
HanXRQChr16g0510081 Helianthus annuus HOM05D000699 ORTHO05D000519 1.0e-16 90.1 65 60.0
HanXRQChr16g0510091 Helianthus annuus HOM05D000699 ORTHO05D000519 1.0e-16 90.1 65 60.0
Lj9A321T82 Lonicera japonica HOM05D000699 ORTHO05D000519 1.3e-16 89.7 94 52.1
HanXRQChr16g0510061 Helianthus annuus HOM05D000699 ORTHO05D000519 3.8e-16 88.2 61 62.3
Lsat_1_v5_gn_7_86261 Lactuca sativa HOM05D000699 ORTHO05D000519 4.9e-16 87.8 81 53.1
Sed0016996 Sechium edule HOM05D000699 ORTHO05D000519 4.9e-16 87.8 80 53.8
Lsat_1_v5_gn_3_95940 Lactuca sativa HOM05D000699 ORTHO05D000519 1.1e-15 86.7 79 55.7
THA.LOC104825374 Tarenaya hassleriana HOM05D000699 ORTHO05D000519 1.1e-15 86.7 90 50.0
SGA_v2.0_scaffold225G43085 Striga asiatica HOM05D000699 ORTHO05D000519 1.4e-15 86.3 89 52.8
HanXRQChr16g0510031 Helianthus annuus HOM05D000699 ORTHO05D000519 1.9e-15 85.9 92 51.1
AUR62013253 Chenopodium quinoa HOM05D000699 ORTHO05D000519 2.5e-15 85.5 73 54.8
MD05G1087500 Malus domestica HOM05D000699 ORTHO05D000519 2.5e-15 85.5 68 58.8
Prupe.8G132700 Prunus persica HOM05D000699 ORTHO05D000519 2.5e-15 85.5 76 56.6
Lsat_1_v5_gn_7_86221 Lactuca sativa HOM05D000699 ORTHO05D000519 4.2e-15 84.7 77 55.8
Lsat_1_v5_gn_7_86641 Lactuca sativa HOM05D000699 ORTHO05D000519 4.2e-15 84.7 71 54.9
Lsat_1_v5_gn_7_86661 Lactuca sativa HOM05D000699 ORTHO05D000519 4.2e-15 84.7 77 55.8
HanXRQChr16g0509861 Helianthus annuus HOM05D000699 ORTHO05D000519 7.1e-15 84.0 86 48.8
MELO3C018477.2 Cucumis melo HOM05D000699 ORTHO05D000519 1.2e-14 83.2 62 58.1
Phvul.006G126400 Phaseolus vulgaris HOM05D000699 ORTHO05D000519 1.2e-14 83.2 85 50.6
PGR042G0840 Punica granatum HOM05D000699 ORTHO05D000519 1.2e-14 83.2 75 50.7
Oeu013736.1 Olea europaea HOM05D000699 ORTHO05D000519 1.6e-14 82.8 82 53.7
AUR62028849 Chenopodium quinoa HOM05D000699 ORTHO05D000519 2.1e-14 82.4 72 50.0
EL10Ac3g05208 Beta vulgaris HOM05D000699 ORTHO05D000519 3.5e-14 81.6 86 48.8
AT3G19430 Arabidopsis thaliana HOM05D000699 ORTHO05D000519 7.9e-14 80.5 72 55.6
BcaC05g28476 Brassica carinata HOM05D000699 ORTHO05D000519 1.0e-13 80.1 78 53.8
C05p45610 Brassica napus HOM05D000699 ORTHO05D000519 1.0e-13 80.1 78 53.8
BolC5t33285H Brassica oleracea HOM05D000699 ORTHO05D000519 1.0e-13 80.1 78 53.8
A05p30180 Brassica napus HOM05D000699 ORTHO05D000519 1.3e-13 79.7 82 51.2
BraA05t21858Z Brassica rapa HOM05D000699 ORTHO05D000519 1.3e-13 79.7 82 51.2
DCAR_003946 Daucus carota HOM05D000699 ORTHO05D000519 1.8e-13 79.3 73 49.3
AUR62006030 Chenopodium quinoa HOM05D000699 ORTHO05D000519 2.3e-13 79.0 67 55.2
AUR62023735 Chenopodium quinoa HOM05D000699 ORTHO05D000519 5.1e-13 77.8 72 47.2
ECA236G1996 Erigeron canadensis HOM05D000699 ORTHO05D000519 8.7e-13 77.0 88 43.2
Medtr2g030825 Medicago truncatula HOM05D000699 ORTHO05D000519 8.7e-13 77.0 90 50.0
Medtr2g030845 Medicago truncatula HOM05D000699 ORTHO05D000519 8.7e-13 77.0 90 50.0
AL3G32840 Arabidopsis lyrata HOM05D000699 ORTHO05D000519 1.1e-12 76.6 101 46.5
BcaC09g48896 Brassica carinata HOM05D000699 ORTHO05D000519 1.1e-12 76.6 89 46.1
BcaC09g48897 Brassica carinata HOM05D000699 ORTHO05D000519 1.1e-12 76.6 89 46.1
C01p44670 Brassica napus HOM05D000699 ORTHO05D000519 1.1e-12 76.6 89 46.1
BolC1t04436H Brassica oleracea HOM05D000699 ORTHO05D000519 1.1e-12 76.6 89 46.1
EL10Ac9g22303 Beta vulgaris HOM05D000699 ORTHO05D000519 1.5e-12 76.3 80 47.5
BcaB06g26002 Brassica carinata HOM05D000699 ORTHO05D000519 1.5e-12 76.3 72 54.2
A01p35230 Brassica napus HOM05D000699 ORTHO05D000519 1.5e-12 76.3 89 46.1
BraA01t03604Z Brassica rapa HOM05D000699 ORTHO05D000519 1.5e-12 76.3 89 46.1
PSO729G0179 Papaver somniferum HOM05D000699 ORTHO05D000519 1.5e-12 76.3 76 51.3
TAR633G2749 Trochodendron aralioides HOM05D000699 ORTHO05D000519 1.5e-12 76.3 81 46.9
TPR.G27827 Trifolium pratense HOM05D000699 ORTHO05D000519 2.5e-12 75.5 75 50.7
PSO724G0461 Papaver somniferum HOM05D000699 ORTHO05D000519 3.3e-12 75.1 112 45.5
BcaB04g20704 Brassica carinata HOM05D000699 ORTHO05D000519 7.4e-12 73.9 86 45.3
CARHR094830 Cardamine hirsuta HOM05D000699 ORTHO05D000519 7.4e-12 73.9 69 53.6
FvH4_2g05430 Fragaria vesca HOM05D000699 ORTHO05D000519 1.3e-11 73.2 80 48.8
PSO302G0231 Papaver somniferum HOM05D000699 ORTHO05D000519 1.3e-11 73.2 93 47.3
PSO170G6907 Papaver somniferum HOM05D000699 ORTHO05D000519 2.2e-11 72.4 93 47.3
PSO170G0806 Papaver somniferum HOM05D000699 ORTHO05D000519 2.8e-11 72.0 96 46.9
Thhalv10022024m.g Eutrema salsugineum HOM05D000699 ORTHO05D000519 6.3e-11 70.9 70 50.0
FAN24G2436 Fragaria x ananassa HOM05D000699 ORTHO05D000519 8.2e-11 70.5 88 43.2
AUR62035598 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.8e-10 69.3 73 49.3
Aa31LG8G6180 Aethionema arabicum HOM05D000699 ORTHO05D000519 2.4e-10 68.9 87 43.7
ECA236G1582 Erigeron canadensis HOM05D000699 ORTHO05D000519 2.4e-10 68.9 71 46.5
PSO541G5354 Papaver somniferum HOM05D000699 ORTHO05D000519 2.4e-10 68.9 91 45.1
Psat1g165640 Pisum sativum HOM05D000699 ORTHO05D000519 4.1e-10 68.2 68 51.5
Medtr2g021580 Medicago truncatula HOM05D000699 ORTHO05D000519 5.3e-10 67.8 64 45.3
QL11p034220 Quercus lobata HOM05D000699 ORTHO05D000519 5.3e-10 67.8 77 48.1
Potri.009G097400 Populus trichocarpa HOM05D000699 ORTHO05D000519 1.7e-08 62.8 65 41.5
Atru.chr5.2593 Acer truncatum HOM05D000699 ORTHO05D000519 2.9e-08 62.0 75 41.3
Peaxi162Scf00152g00015 Petunia axillaris HOM05D000699 ORTHO05D000519 3.2e-07 58.5 81 42.0
Ah.01g010790 Amaranthus hybridus HOM05D000182 ORTHO05D000112 7.2e-07 57.4 43 58.1
AUR62016785 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.6e-06 56.2 56 46.4
PSO675G3610 Papaver somniferum HOM05D000699 ORTHO05D000519 1.6e-06 56.2 85 41.2
Ah.01g018050 Amaranthus hybridus HOM05D000699 ORTHO05D000519 4.6e-06 54.7 43 53.5
EL10Ac9g22304 Beta vulgaris HOM05D000699 ORTHO05D000519 4.6e-06 54.7 56 44.6


User provided reference genes

Program Settings