Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 2.1e-185 652.1 314 100.0
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 7.6e-183 643.7 314 98.4
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 3.6e-169 598.2 300 95.7
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 9.6e-154 547.0 299 88.6
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 8.2e-153 543.9 300 86.0
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.0e-147 526.9 305 83.9
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.9e-125 453.0 287 72.5
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 5.5e-125 451.4 287 72.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.2e-124 450.3 288 75.0
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.5e-122 443.4 295 71.9
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.5e-122 443.4 283 73.5
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.0e-122 443.0 295 71.9
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 4.4e-122 441.8 287 71.8
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 4.8e-121 438.3 298 69.1
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.1e-120 437.2 287 71.8
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 2.4e-120 436.0 294 70.4
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 7.0e-120 434.5 297 72.4
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.6e-119 433.3 283 73.1
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 2.0e-119 433.0 283 73.1
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 3.5e-119 432.2 287 73.5
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 7.7e-119 431.0 287 71.4
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.3e-118 430.3 283 72.4
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 1.3e-118 430.3 287 69.0
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 3.8e-118 428.7 283 73.5
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 5.0e-118 428.3 288 69.4
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 5.0e-118 428.3 283 72.1
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 6.5e-118 427.9 296 72.0
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 8.5e-118 427.6 287 71.4
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 1.1e-117 427.2 290 70.0
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 1.5e-117 426.8 299 68.6
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 1.9e-117 426.4 288 68.8
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 2.5e-117 426.0 283 70.3
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.2e-117 425.6 313 66.1
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 4.2e-117 425.2 297 70.7
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 9.4e-117 424.1 286 70.3
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 9.4e-117 424.1 283 71.4
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.6e-116 423.3 283 70.0
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 2.7e-116 422.5 283 69.6
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 3.6e-116 422.2 282 73.4
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 3.6e-116 422.2 283 70.0
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 6.1e-116 421.4 282 71.6
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.1e-116 421.4 283 69.6
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 8.0e-116 421.0 294 68.4
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 2.3e-115 419.5 285 68.1
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.3e-115 419.5 300 71.3
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 3.0e-115 419.1 283 69.3
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.5e-114 416.8 283 74.6
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 3.4e-114 415.6 294 66.3
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 4.4e-114 415.2 301 66.8
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 7.5e-114 414.5 296 66.6
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 7.5e-114 414.5 294 68.7
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 1.3e-113 413.7 302 65.9
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.7e-113 413.3 289 68.2
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 3.1e-112 409.1 287 68.6
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 4.1e-112 408.7 298 66.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 5.4e-112 408.3 287 68.6
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 5.4e-112 408.3 287 66.9
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 5.4e-112 408.3 318 64.8
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 7.0e-112 407.9 284 68.0
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 9.1e-112 407.5 289 66.1
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 9.1e-112 407.5 295 64.7
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 3.8e-110 402.1 318 61.9
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 5.0e-110 401.7 288 66.7
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.5e-109 400.2 282 66.0
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.7e-108 396.0 283 67.5
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 2.7e-108 396.0 340 59.4
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.0e-107 394.0 256 73.0
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.0e-107 394.0 293 63.5
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 2.3e-107 392.9 289 62.3
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 3.0e-107 392.5 287 63.4
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 5.2e-107 391.7 287 63.8
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 6.8e-107 391.3 288 62.2
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.5e-106 390.2 284 64.8
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 2.0e-106 389.8 287 63.8
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 7.5e-106 387.9 295 65.1
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.4e-104 382.9 296 61.5
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 5.4e-104 381.7 296 61.5
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 2.0e-103 379.8 286 62.6
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 4.5e-103 378.6 296 60.5
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.7e-103 377.9 281 66.5
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.7e-102 376.7 296 60.8
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.7e-102 376.7 296 60.8
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 1.7e-102 376.7 288 64.6
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 2.1e-100 369.8 289 59.9
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.1e-100 369.8 283 66.1
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.0e-99 367.5 286 59.8
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 2.0e-98 363.2 293 61.8
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.3e-97 360.5 300 62.7
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 4.9e-97 358.6 372 50.0
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 1.3e-94 350.5 224 74.6
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.3e-93 345.5 286 59.4
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.6e-92 342.4 284 58.8
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 3.1e-91 339.3 224 73.7
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.0e-90 336.7 283 58.0
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 6.6e-86 321.6 295 54.2
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.5e-85 319.7 281 53.4
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 6.2e-84 315.1 281 54.4
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 4.0e-83 312.4 282 53.5
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 2.6e-82 309.7 218 68.3
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 2.9e-81 306.2 282 53.2
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 1.9e-80 303.5 257 59.1
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 1.5e-77 293.9 440 42.3
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 4.4e-66 255.8 182 65.9
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 2.9e-65 253.1 291 46.4
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 1.7e-62 243.8 338 39.6
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.0e-59 232.6 186 59.7
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 1.3e-54 217.6 195 56.4
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 2.5e-53 213.4 159 62.3
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.6e-52 210.7 173 57.2
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 1.7e-49 200.7 208 54.8
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-45 186.8 143 68.5
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 9.0e-35 151.8 118 58.5
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 2.0e-34 150.6 117 60.7
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 4.3e-29 132.9 435 23.7
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 6.9e-27 125.6 293 28.3
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 4.1e-19 99.8 103 54.4
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.2e-18 98.2 60 76.7
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 5.0e-17 92.8 67 59.7
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.2e-16 90.1 53 84.9
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 1.4e-06 58.2 54 55.6


User provided reference genes

Program Settings