Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 3.9e-138 495.0 284 100.0
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 1.8e-135 486.1 284 96.5
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 3.6e-131 471.9 284 95.1
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 2.4e-103 379.4 290 74.5
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 2.5e-84 316.2 231 75.8
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 3.1e-82 309.3 218 80.3
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 9.2e-71 271.2 234 61.5
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 2.8e-67 259.6 235 60.0
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 6.2e-67 258.5 235 57.4
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 3.4e-65 252.7 237 56.5
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 6.4e-64 248.4 235 59.1
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 8.4e-64 248.1 235 57.4
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 1.1e-63 247.7 234 57.3
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.4e-63 247.3 240 55.8
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 1.9e-63 246.9 243 55.1
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 1.9e-63 246.9 238 56.7
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 2.4e-63 246.5 243 53.9
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 3.2e-63 246.1 234 59.0
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 3.2e-63 246.1 238 55.5
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.2e-62 244.2 240 55.0
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 1.7e-61 240.4 243 55.1
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 2.3e-61 240.0 232 56.0
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 3.9e-61 239.2 242 57.0
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 5.1e-61 238.8 232 55.6
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 6.6e-61 238.4 232 55.6
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 4.3e-60 235.7 213 60.6
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 4.3e-60 235.7 237 54.4
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 1.1e-58 231.1 237 54.0
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 2.4e-58 229.9 238 53.4
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 2.4e-58 229.9 238 53.4
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 2.0e-57 226.9 237 53.6
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 3.4e-57 226.1 211 58.8
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 3.4e-57 226.1 239 56.9
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 3.4e-57 226.1 353 43.3
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 7.6e-57 224.9 235 52.8
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 9.9e-57 224.6 273 48.0
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.9e-56 223.0 220 55.5
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 2.9e-56 223.0 220 55.5
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 3.8e-56 222.6 236 53.4
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 4.9e-56 222.2 237 52.7
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 2.4e-55 219.9 236 51.3
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 7.9e-54 214.9 212 57.5
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 7.9e-54 214.9 397 38.3
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 1.0e-53 214.5 235 52.3
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 1.3e-53 214.2 236 53.0
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 1.7e-53 213.8 238 52.1
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 3.9e-53 212.6 238 51.3
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 1.1e-52 211.1 410 37.3
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 7.4e-52 208.4 236 48.3
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 1.6e-51 207.2 236 48.3
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 2.1e-51 206.8 237 48.9
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 8.1e-51 204.9 236 52.5
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 3.1e-50 203.0 237 48.1
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 4.0e-50 202.6 238 50.8
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 6.9e-50 201.8 237 47.7
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 3.4e-49 199.5 235 51.1
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 3.4e-49 199.5 234 47.9
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 2.2e-48 196.8 239 47.3
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 1.1e-47 194.5 233 48.9
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 1.4e-47 194.1 236 48.7
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.9e-47 193.7 240 46.7
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 3.2e-47 193.0 231 48.9
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 4.2e-47 192.6 271 45.8
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 5.5e-47 192.2 243 53.9
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 9.3e-47 191.4 235 48.9
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 3.5e-46 189.5 246 49.2
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 5.1e-45 185.7 229 48.0
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 6.7e-45 185.3 235 46.8
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 8.7e-45 184.9 235 46.8
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 9.6e-44 181.4 235 46.8
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 8.1e-43 178.3 239 44.4
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 1.4e-42 177.6 234 46.2
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 1.8e-42 177.2 246 44.3
SalBow6G6902 Salvia bowleyana HOM05D005413 ORTHO05D006536 4.0e-42 176.0 240 46.7
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 2.0e-41 173.7 244 44.7
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 2.6e-41 173.3 240 40.8
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 2.6e-41 173.3 235 45.1
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 3.4e-41 172.9 244 44.7
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 3.4e-41 172.9 244 44.7
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 3.4e-41 172.9 240 44.6
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 5.8e-41 172.2 248 44.8
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 5.8e-41 172.2 241 43.6
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 1.3e-40 171.0 244 44.3
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 1.4e-39 167.5 244 43.9
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 1.4e-39 167.5 220 45.9
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.4e-39 167.5 241 42.3
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 5.5e-39 165.6 235 40.9
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 9.3e-39 164.9 239 42.7
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 3.5e-38 162.9 234 43.2
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 3.0e-37 159.8 232 42.2
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 8.7e-37 158.3 244 41.4
Cfa010502 Carpinus fangiana HOM05D005413 ORTHO05D006536 2.5e-36 156.8 235 40.0
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 5.7e-36 155.6 241 40.7
Ah.03g136210 Amaranthus hybridus HOM05D005413 ORTHO05D006536 7.4e-36 155.2 242 39.7
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 7.4e-36 155.2 247 42.1
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 9.6e-36 154.8 176 48.3
Sc09g0004800 Simmondsia chinensis HOM05D005413 ORTHO05D006536 1.6e-35 154.1 234 41.5
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 2.1e-35 153.7 216 44.4
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 4.1e-34 149.4 250 41.6
EL10Ac6g13493 Beta vulgaris HOM05D005413 ORTHO05D006536 9.0e-34 148.3 238 39.9
QL04p048808 Quercus lobata HOM05D005413 ORTHO05D006536 1.5e-33 147.5 242 38.8
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 2.0e-33 147.1 258 40.3
Haze_03431 Corylus avellana HOM05D005413 ORTHO05D006536 2.6e-33 146.7 176 46.0
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 3.4e-33 146.4 210 43.8
Dinv33562 Davidia involucrata HOM05D005413 ORTHO05D006536 5.9e-33 145.6 109 64.2
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 1.7e-32 144.1 195 48.2
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 8.5e-32 141.7 249 39.4
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 1.9e-31 140.6 212 40.6
vmacro07276 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 2.5e-31 140.2 144 54.2
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 4.2e-31 139.4 238 40.8
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 2.1e-30 137.1 229 40.6
PSO339G2181 Papaver somniferum HOM05D005413 ORTHO05D006536 1.8e-29 134.0 262 42.4
Rhsim03G0094100 Rhododendron simsii HOM05D005413 ORTHO05D006536 2.3e-29 133.7 147 51.7
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 3.0e-29 133.3 174 47.7
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 6.7e-29 132.1 240 37.9
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 4.3e-28 129.4 215 39.5
PSO384G0849 Papaver somniferum HOM05D005413 ORTHO05D006536 4.3e-28 129.4 261 40.6
Oeu033267.1 Olea europaea HOM05D005413 ORTHO05D006536 3.7e-27 126.3 230 38.7
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 1.5e-25 120.9 247 36.4
Oeu029208.1 Olea europaea HOM05D005413 ORTHO05D006536 2.0e-25 120.6 83 71.1
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 2.6e-25 120.2 246 35.4
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 3.8e-24 116.3 249 33.7
Lj5g0017620 Lotus japonicus HOM05D005413 ORTHO05D006536 4.2e-23 112.8 216 37.5
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 1.2e-22 111.3 250 34.8
Haze_03425 Corylus avellana HOM05D005413 ORTHO05D006536 3.6e-22 109.8 200 35.0
TPR.G10267 Trifolium pratense HOM05D005413 ORTHO05D006536 1.0e-21 108.2 218 34.9
arahy.Tifrunner.gnm1.ann1.0IPW5R Arachis hypogaea HOM05D005413 ORTHO05D006536 3.0e-21 106.7 215 36.3
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 3.9e-21 106.3 228 33.8
arahy.Tifrunner.gnm1.ann1.BD57S3 Arachis hypogaea HOM05D005413 ORTHO05D006536 5.1e-21 105.9 215 35.8
Lsat_1_v5_gn_2_106300 Lactuca sativa HOM05D005413 ORTHO05D006536 2.6e-20 103.6 243 35.0
Medtr1g090350 Medicago truncatula HOM05D005413 ORTHO05D006536 4.3e-20 102.8 211 34.6
Phvul.007G136700 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 4.3e-20 102.8 179 39.1
Ca_10423_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 7.4e-20 102.1 214 36.0
Lj2C36T10 Lonicera japonica HOM05D005413 ORTHO05D006536 3.7e-19 99.8 246 33.3
Lalb_Chr21g0312751 Lupinus albus HOM05D005413 ORTHO05D006536 1.1e-18 98.2 153 43.1
Cpa.g.sc33.125 Carica papaya HOM05D005413 ORTHO05D006536 2.6e-17 93.6 83 59.0
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 2.9e-16 90.1 222 32.4
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.1e-15 88.2 221 33.5
BcaNung07133 Brassica carinata HOM05D005413 ORTHO05D006536 8.8e-13 78.6 131 40.5
PGR044G1324 Punica granatum HOM05D003044 ORTHO05D001869 6.3e-11 72.4 69 53.6
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 4.5e-09 66.2 75 46.7
BcaB05g22753 Brassica carinata HOM05D005413 ORTHO05D006536 5.0e-08 62.8 93 40.9
Hma1.2p1_0298F.1_g117400 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 5.0e-08 62.8 61 54.1


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