Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 2.0e-40 168.7 86 100.0
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.7e-40 167.2 86 98.8
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 3.3e-32 141.4 86 81.4
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 4.0e-25 117.9 87 67.8
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 3.7e-23 111.3 86 62.8
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 6.3e-23 110.5 86 65.1
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 8.3e-23 110.2 86 67.4
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 60.5
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 59.3
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.7e-20 102.4 86 59.3
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.9e-20 101.7 84 61.9
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 3.8e-20 101.3 86 59.3
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 5.0e-20 100.9 86 59.3
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 6.5e-20 100.5 86 64.0
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 1.1e-19 99.8 86 60.5
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.9e-19 99.0 86 59.3
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 2.5e-19 98.6 86 61.6
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 2.5e-19 98.6 86 61.6
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 3.2e-19 98.2 90 57.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 60.5
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 4.2e-19 97.8 86 58.1
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 4.2e-19 97.8 86 62.8
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 62.8
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 53.5
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 7.2e-19 97.1 90 56.7
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 7.2e-19 97.1 80 58.8
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 59.3
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 62.8
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 61.6
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 59.3
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 61.6
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.6e-18 95.9 86 58.1
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.6e-18 95.9 86 59.3
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.6e-18 95.9 86 57.0
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 1.6e-18 95.9 85 61.2
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 2.1e-18 95.5 86 61.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 2.7e-18 95.1 91 59.3
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 3.6e-18 94.7 86 60.5
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 4.7e-18 94.4 86 54.7
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-18 94.0 86 55.8
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 6.1e-18 94.0 86 55.8
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 6.1e-18 94.0 86 58.1
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 6.1e-18 94.0 86 58.1
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 1.4e-17 92.8 86 60.5
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 1.4e-17 92.8 80 58.8
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 2.3e-17 92.0 86 55.8
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.0e-17 91.7 86 55.8
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 6.8e-17 90.5 86 57.0
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 8.8e-17 90.1 87 55.2
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 8.8e-17 90.1 87 55.2
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 8.8e-17 90.1 87 55.2
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 8.8e-17 90.1 87 55.2
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 8.8e-17 90.1 87 55.2
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.2e-16 89.7 83 56.6
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.2e-16 89.7 86 53.5
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.2e-16 89.7 86 58.1
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.2e-16 89.7 85 56.5
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.2e-16 89.7 86 54.7
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.0e-16 89.0 74 58.1
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 2.0e-16 89.0 86 53.5
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 2.0e-16 89.0 86 54.7
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 9.8e-16 86.7 86 54.7
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 9.8e-16 86.7 86 53.5
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 9.8e-16 86.7 86 55.8
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.2e-15 85.5 86 50.0
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.8e-15 85.1 86 53.5
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-15 84.7 87 52.9
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 4.8e-15 84.3 90 51.1
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 6.3e-15 84.0 86 52.3
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 6.3e-15 84.0 86 53.5
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 8.3e-15 83.6 86 50.0
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 8.3e-15 83.6 86 50.0
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 2.4e-14 82.0 86 53.5
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 2.4e-14 82.0 87 54.0
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.1e-14 81.6 85 54.1
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 5.4e-14 80.9 86 51.2
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 5.4e-14 80.9 86 51.2
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 5.4e-14 80.9 86 53.5
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 7.0e-14 80.5 86 51.2
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 9.1e-14 80.1 86 51.2
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.2e-13 79.7 86 51.2
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.2e-13 79.7 83 50.6
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.6e-13 79.3 86 51.2
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.6e-13 79.3 86 51.2
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.6e-13 79.3 86 51.2
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.0e-13 79.0 85 45.9
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 2.0e-13 79.0 83 50.6
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 2.7e-13 78.6 83 57.8
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 2.7e-13 78.6 47 89.4
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 3.5e-13 78.2 85 50.6
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 3.5e-13 78.2 84 57.1
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 4.5e-13 77.8 79 58.2
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 5.9e-13 77.4 90 48.9
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 5.9e-13 77.4 86 52.3
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 7.7e-13 77.0 83 50.6
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 1.3e-12 76.3 87 50.6
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.3e-12 76.3 75 54.7
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 2.3e-12 75.5 64 53.1
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.3e-12 75.5 79 48.1
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 5.0e-12 74.3 86 51.2
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.1e-11 73.2 82 48.8
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 1.9e-11 72.4 82 47.6
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 4.0e-09 64.7 86 45.3
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 2.6e-08 62.0 41 73.2
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 7.5e-08 60.5 47 68.1
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 1.7e-07 59.3 92 42.4
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 1.7e-07 59.3 174 28.2
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 8.3e-07 57.0 42 69.0
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 4.1e-06 54.7 46 58.7
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 4.1e-06 54.7 93 38.7


User provided reference genes

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