Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.9e-194 682.9 518 100.0
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 7.1e-186 654.4 518 97.5
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 5.4e-170 601.7 518 92.9
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 1.8e-120 437.2 519 78.6
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 3.0e-112 409.8 521 76.4
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.3e-98 363.2 525 73.1
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.2e-94 350.5 525 69.7
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 9.6e-42 175.6 526 46.0
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 1.0e-38 165.6 516 53.5
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.7e-38 164.9 527 50.9
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 9.3e-37 159.1 523 49.3
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 1.6e-36 158.3 523 54.3
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 4.6e-36 156.8 525 43.6
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 3.9e-35 153.7 535 38.7
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 1.1e-34 152.1 530 45.8
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.9e-34 151.4 554 35.4
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 3.3e-34 150.6 493 51.9
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.3e-33 148.7 516 53.7
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 6.3e-33 146.4 325 37.5
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.8e-32 144.8 529 48.8
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 3.1e-32 144.1 516 46.7
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 1.2e-31 142.1 529 41.8
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 5.9e-31 139.8 320 36.2
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 7.6e-31 139.4 319 36.1
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 1.3e-30 138.7 521 52.2
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.2e-30 137.9 316 39.2
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.2e-30 137.9 519 51.3
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.8e-30 137.1 524 47.7
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 5.0e-30 136.7 562 37.9
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 5.0e-30 136.7 516 52.3
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 8.5e-30 136.0 520 52.1
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 1.1e-29 135.6 373 58.4
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 1.9e-29 134.8 527 48.2
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 2.5e-29 134.4 518 51.4
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 5.5e-29 133.3 337 54.6
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 7.2e-29 132.9 527 51.4
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 2.1e-28 131.3 529 50.3
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.7e-28 131.0 518 46.1
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 4.6e-28 130.2 392 62.0
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 4.6e-28 130.2 521 51.1
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 2.3e-27 127.9 525 47.4
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 5.1e-27 126.7 519 52.0
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.1e-26 125.6 320 33.8
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.9e-26 124.8 522 41.2
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 2.5e-26 124.4 523 41.5
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 4.3e-26 123.6 521 36.1
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.4e-26 122.9 535 41.1
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 1.3e-25 122.1 532 48.3
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.3e-25 122.1 516 43.0
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 2.8e-25 120.9 516 51.9
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 6.3e-25 119.8 523 48.2
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 8.2e-25 119.4 516 51.6
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.4e-24 118.6 515 51.8
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 3.1e-24 117.5 518 35.7
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.5e-23 115.2 517 40.4
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 3.4e-23 114.0 524 45.6
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 4.5e-23 113.6 523 49.9
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.0e-22 112.5 522 50.8
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 2.9e-22 110.9 523 48.9
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 3.8e-22 110.5 516 49.6
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 5.0e-22 110.2 369 61.2
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 6.5e-22 109.8 517 37.5
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 1.6e-20 105.1 63 81.0
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 1.6e-20 105.1 293 71.7
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 3.6e-20 104.0 365 62.2
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 6.1e-20 103.2 535 40.2
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 1.8e-19 101.7 517 48.0
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.0e-19 100.9 522 42.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 3.9e-19 100.5 532 48.1
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 5.1e-19 100.1 523 48.2
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 8.8e-19 99.4 120 51.7
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 8.8e-19 99.4 160 44.4
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.1e-18 99.0 518 44.6
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 1.5e-18 98.6 499 50.7
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 1.5e-18 98.6 316 31.6
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 2.0e-18 98.2 314 30.6
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.0e-18 98.2 558 45.5
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 4.4e-18 97.1 531 49.0
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 8.2e-17 92.8 61 73.8
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.1e-16 92.4 319 67.4
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 2.4e-16 91.3 523 47.6
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.5e-15 88.6 73 63.0
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 1.5e-15 88.6 526 48.3
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 3.4e-15 87.4 460 52.6
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 4.5e-15 87.0 518 38.4
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.7e-14 85.1 319 30.4
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 1.4e-13 82.0 316 30.7
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 3.2e-13 80.9 519 48.6
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 5.5e-13 80.1 273 52.4
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 5.5e-13 80.1 316 32.9
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 6.1e-12 76.6 61 57.4
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.5e-10 72.0 520 47.5
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 2.0e-10 71.6 281 66.9
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 2.6e-10 71.2 301 62.8
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 2.4e-08 64.7 78 46.2
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 2.4e-08 64.7 78 46.2
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 2.4e-08 64.7 78 46.2
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 5.3e-08 63.5 78 46.2
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 1.2e-07 62.4 303 62.7
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.6e-07 62.0 42 73.8
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.7e-07 59.7 316 27.5
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 1.0e-06 59.3 75 45.3
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 1.0e-06 59.3 75 45.3
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 1.7e-06 58.5 95 41.1
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 3.8e-06 57.4 518 44.8
CSS0011895 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 5.0e-06 57.0 39 74.4
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 5.0e-06 57.0 75 42.7


User provided reference genes

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